Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.79■■□□□ 1.08
CHD8Q9HCK8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHD8Q9HCK8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CHD8Q9HCK8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHD8Q9HCK8 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CHD8Q9HCK8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHD8Q9HCK8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.78■■□□□ 1.08
CHD8Q9HCK8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHD8Q9HCK8 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHD8Q9HCK8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
CHD8Q9HCK8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHD8Q9HCK8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHD8Q9HCK8 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC21.77■■□□□ 1.08
CHD8Q9HCK8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CHD8Q9HCK8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHD8Q9HCK8 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.77■■□□□ 1.08
CHD8Q9HCK8 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.77■■□□□ 1.08
CHD8Q9HCK8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CHD8Q9HCK8 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.77■■□□□ 1.08
CHD8Q9HCK8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.77■■□□□ 1.08
CHD8Q9HCK8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.77■■□□□ 1.08
CHD8Q9HCK8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CHD8Q9HCK8 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHD8Q9HCK8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHD8Q9HCK8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CHD8Q9HCK8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.76■■□□□ 1.07
CHD8Q9HCK8 KRT18P6-201ENST00000555540 1265 ntBASIC21.76■■□□□ 1.07
CHD8Q9HCK8 AC087239.1-201ENST00000622671 572 ntBASIC21.76■■□□□ 1.07
CHD8Q9HCK8 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHD8Q9HCK8 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHD8Q9HCK8 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CHD8Q9HCK8 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.75■■□□□ 1.07
CHD8Q9HCK8 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
CHD8Q9HCK8 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.75■■□□□ 1.07
CHD8Q9HCK8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.75■■□□□ 1.07
CHD8Q9HCK8 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
CHD8Q9HCK8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
CHD8Q9HCK8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
CHD8Q9HCK8 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHD8Q9HCK8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.75■■□□□ 1.07
CHD8Q9HCK8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.75■■□□□ 1.07
CHD8Q9HCK8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHD8Q9HCK8 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHD8Q9HCK8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHD8Q9HCK8 AC090877.2-201ENST00000558441 1738 ntBASIC21.74■■□□□ 1.07
CHD8Q9HCK8 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CHD8Q9HCK8 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.74■■□□□ 1.07
CHD8Q9HCK8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CHD8Q9HCK8 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHD8Q9HCK8 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHD8Q9HCK8 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.74■■□□□ 1.07
CHD8Q9HCK8 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.74■■□□□ 1.07
CHD8Q9HCK8 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.74■■□□□ 1.07
CHD8Q9HCK8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CHD8Q9HCK8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHD8Q9HCK8 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
CHD8Q9HCK8 MIR572-201ENST00000384983 95 ntBASIC21.73■■□□□ 1.07
CHD8Q9HCK8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.73■■□□□ 1.07
CHD8Q9HCK8 FOXO3B-201ENST00000395675 1928 ntBASIC21.73■■□□□ 1.07
CHD8Q9HCK8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.73■■□□□ 1.07
CHD8Q9HCK8 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
CHD8Q9HCK8 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHD8Q9HCK8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.72■■□□□ 1.07
CHD8Q9HCK8 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.72■■□□□ 1.07
CHD8Q9HCK8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CHD8Q9HCK8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHD8Q9HCK8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHD8Q9HCK8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CHD8Q9HCK8 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.72■■□□□ 1.07
CHD8Q9HCK8 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CHD8Q9HCK8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHD8Q9HCK8 PRORSD1P-201ENST00000295112 541 ntBASIC21.72■■□□□ 1.07
CHD8Q9HCK8 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.72■■□□□ 1.07
CHD8Q9HCK8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.72■■□□□ 1.07
CHD8Q9HCK8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.72■■□□□ 1.07
CHD8Q9HCK8 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHD8Q9HCK8 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.72■■□□□ 1.07
CHD8Q9HCK8 GPX1P1-201ENST00000388829 606 ntBASIC21.71■■□□□ 1.07
CHD8Q9HCK8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CHD8Q9HCK8 AC126544.1-201ENST00000580842 1059 ntBASIC21.71■■□□□ 1.07
CHD8Q9HCK8 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC21.71■■□□□ 1.07
CHD8Q9HCK8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHD8Q9HCK8 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
CHD8Q9HCK8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHD8Q9HCK8 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHD8Q9HCK8 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHD8Q9HCK8 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CHD8Q9HCK8 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHD8Q9HCK8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHD8Q9HCK8 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
CHD8Q9HCK8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.71■■□□□ 1.07
CHD8Q9HCK8 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.71■■□□□ 1.07
CHD8Q9HCK8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CHD8Q9HCK8 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHD8Q9HCK8 AL354811.1-201ENST00000610286 706 ntBASIC21.7■■□□□ 1.06
CHD8Q9HCK8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.7■■□□□ 1.06
CHD8Q9HCK8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHD8Q9HCK8 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.7■■□□□ 1.06
CHD8Q9HCK8 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CHD8Q9HCK8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms