Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCNX3Q9H6A9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.87■□□□□ 0.93
PCNX3Q9H6A9 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCNX3Q9H6A9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCNX3Q9H6A9 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCNX3Q9H6A9 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCNX3Q9H6A9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCNX3Q9H6A9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.86■□□□□ 0.93
PCNX3Q9H6A9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.86■□□□□ 0.93
PCNX3Q9H6A9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.86■□□□□ 0.93
PCNX3Q9H6A9 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCNX3Q9H6A9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCNX3Q9H6A9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.85■□□□□ 0.93
PCNX3Q9H6A9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCNX3Q9H6A9 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.85■□□□□ 0.93
PCNX3Q9H6A9 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.85■□□□□ 0.93
PCNX3Q9H6A9 AL022069.1-201ENST00000568025 1636 ntBASIC20.85■□□□□ 0.93
PCNX3Q9H6A9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.85■□□□□ 0.93
PCNX3Q9H6A9 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCNX3Q9H6A9 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCNX3Q9H6A9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCNX3Q9H6A9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCNX3Q9H6A9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
PCNX3Q9H6A9 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.85■□□□□ 0.93
PCNX3Q9H6A9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.85■□□□□ 0.93
PCNX3Q9H6A9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.85■□□□□ 0.93
PCNX3Q9H6A9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.85■□□□□ 0.93
PCNX3Q9H6A9 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PCNX3Q9H6A9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCNX3Q9H6A9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PCNX3Q9H6A9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.84■□□□□ 0.93
PCNX3Q9H6A9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.84■□□□□ 0.93
PCNX3Q9H6A9 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCNX3Q9H6A9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.84■□□□□ 0.93
PCNX3Q9H6A9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.84■□□□□ 0.93
PCNX3Q9H6A9 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCNX3Q9H6A9 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCNX3Q9H6A9 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.83■□□□□ 0.93
PCNX3Q9H6A9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCNX3Q9H6A9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PCNX3Q9H6A9 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCNX3Q9H6A9 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCNX3Q9H6A9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCNX3Q9H6A9 AC004448.1-201ENST00000458332 883 ntBASIC20.83■□□□□ 0.92
PCNX3Q9H6A9 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
PCNX3Q9H6A9 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCNX3Q9H6A9 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCNX3Q9H6A9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
PCNX3Q9H6A9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.82■□□□□ 0.92
PCNX3Q9H6A9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.82■□□□□ 0.92
PCNX3Q9H6A9 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.82■□□□□ 0.92
PCNX3Q9H6A9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCNX3Q9H6A9 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PCNX3Q9H6A9 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCNX3Q9H6A9 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
PCNX3Q9H6A9 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PCNX3Q9H6A9 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCNX3Q9H6A9 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
PCNX3Q9H6A9 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCNX3Q9H6A9 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCNX3Q9H6A9 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PCNX3Q9H6A9 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCNX3Q9H6A9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCNX3Q9H6A9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCNX3Q9H6A9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.81■□□□□ 0.92
PCNX3Q9H6A9 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCNX3Q9H6A9 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCNX3Q9H6A9 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCNX3Q9H6A9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.81■□□□□ 0.92
PCNX3Q9H6A9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.8■□□□□ 0.92
PCNX3Q9H6A9 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.8■□□□□ 0.92
PCNX3Q9H6A9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.8■□□□□ 0.92
PCNX3Q9H6A9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.8■□□□□ 0.92
PCNX3Q9H6A9 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
PCNX3Q9H6A9 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCNX3Q9H6A9 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCNX3Q9H6A9 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCNX3Q9H6A9 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCNX3Q9H6A9 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCNX3Q9H6A9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.8■□□□□ 0.92
PCNX3Q9H6A9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCNX3Q9H6A9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCNX3Q9H6A9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCNX3Q9H6A9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCNX3Q9H6A9 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCNX3Q9H6A9 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PCNX3Q9H6A9 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.79■□□□□ 0.92
PCNX3Q9H6A9 AC131281.2-201ENST00000520478 145 ntBASIC20.79■□□□□ 0.92
PCNX3Q9H6A9 AC131212.1-201ENST00000613771 668 ntBASIC20.79■□□□□ 0.92
PCNX3Q9H6A9 MIR6724-1-201ENST00000616420 92 ntBASIC20.79■□□□□ 0.92
PCNX3Q9H6A9 MIR6724-2-201ENST00000616483 92 ntBASIC20.79■□□□□ 0.92
PCNX3Q9H6A9 MIR6724-4-201ENST00000617390 92 ntBASIC20.79■□□□□ 0.92
PCNX3Q9H6A9 MIR6724-3-201ENST00000622482 92 ntBASIC20.79■□□□□ 0.92
PCNX3Q9H6A9 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCNX3Q9H6A9 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PCNX3Q9H6A9 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.79■□□□□ 0.92
PCNX3Q9H6A9 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCNX3Q9H6A9 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCNX3Q9H6A9 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCNX3Q9H6A9 MTDHP2-201ENST00000601468 714 ntBASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms