Protein–RNA interactions for Protein: Q99878

HIST1H2AJ, Histone H2A type 1-J, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AJQ99878 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.37■■□□□ 1.17
HIST1H2AJQ99878 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.37■■□□□ 1.17
HIST1H2AJQ99878 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
HIST1H2AJQ99878 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
HIST1H2AJQ99878 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.37■■□□□ 1.17
HIST1H2AJQ99878 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HIST1H2AJQ99878 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
HIST1H2AJQ99878 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
HIST1H2AJQ99878 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HIST1H2AJQ99878 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
HIST1H2AJQ99878 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.36■■□□□ 1.17
HIST1H2AJQ99878 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
HIST1H2AJQ99878 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
HIST1H2AJQ99878 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HIST1H2AJQ99878 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HIST1H2AJQ99878 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.36■■□□□ 1.17
HIST1H2AJQ99878 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HIST1H2AJQ99878 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HIST1H2AJQ99878 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22.35■■□□□ 1.17
HIST1H2AJQ99878 AC137630.3-201ENST00000607245 391 ntBASIC22.35■■□□□ 1.17
HIST1H2AJQ99878 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC22.35■■□□□ 1.17
HIST1H2AJQ99878 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
HIST1H2AJQ99878 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HIST1H2AJQ99878 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
HIST1H2AJQ99878 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.34■■□□□ 1.17
HIST1H2AJQ99878 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.34■■□□□ 1.17
HIST1H2AJQ99878 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
HIST1H2AJQ99878 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HIST1H2AJQ99878 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.34■■□□□ 1.17
HIST1H2AJQ99878 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HIST1H2AJQ99878 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HIST1H2AJQ99878 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
HIST1H2AJQ99878 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
HIST1H2AJQ99878 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
HIST1H2AJQ99878 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HIST1H2AJQ99878 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HIST1H2AJQ99878 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
HIST1H2AJQ99878 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
HIST1H2AJQ99878 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
HIST1H2AJQ99878 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HIST1H2AJQ99878 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
HIST1H2AJQ99878 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.33■■□□□ 1.17
HIST1H2AJQ99878 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.17
HIST1H2AJQ99878 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.33■■□□□ 1.17
HIST1H2AJQ99878 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HIST1H2AJQ99878 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HIST1H2AJQ99878 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
HIST1H2AJQ99878 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
HIST1H2AJQ99878 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.33■■□□□ 1.16
HIST1H2AJQ99878 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
HIST1H2AJQ99878 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HIST1H2AJQ99878 BX664725.1-201ENST00000438252 379 ntBASIC22.32■■□□□ 1.16
HIST1H2AJQ99878 RARRES2P1-201ENST00000474487 481 ntBASIC22.32■■□□□ 1.16
HIST1H2AJQ99878 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
HIST1H2AJQ99878 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HIST1H2AJQ99878 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HIST1H2AJQ99878 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.32■■□□□ 1.16
HIST1H2AJQ99878 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HIST1H2AJQ99878 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HIST1H2AJQ99878 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
HIST1H2AJQ99878 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.31■■□□□ 1.16
HIST1H2AJQ99878 AC004448.1-201ENST00000458332 883 ntBASIC22.31■■□□□ 1.16
HIST1H2AJQ99878 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.31■■□□□ 1.16
HIST1H2AJQ99878 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.31■■□□□ 1.16
HIST1H2AJQ99878 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HIST1H2AJQ99878 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HIST1H2AJQ99878 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.31■■□□□ 1.16
HIST1H2AJQ99878 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
HIST1H2AJQ99878 ALDH1A3-203ENST00000557963 1670 ntBASIC22.3■■□□□ 1.16
HIST1H2AJQ99878 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.3■■□□□ 1.16
HIST1H2AJQ99878 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HIST1H2AJQ99878 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.3■■□□□ 1.16
HIST1H2AJQ99878 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HIST1H2AJQ99878 PRTG-204ENST00000561292 833 ntTSL 3 BASIC22.3■■□□□ 1.16
HIST1H2AJQ99878 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
HIST1H2AJQ99878 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
HIST1H2AJQ99878 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HIST1H2AJQ99878 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HIST1H2AJQ99878 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
HIST1H2AJQ99878 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
HIST1H2AJQ99878 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
HIST1H2AJQ99878 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HIST1H2AJQ99878 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.29■■□□□ 1.16
HIST1H2AJQ99878 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.29■■□□□ 1.16
HIST1H2AJQ99878 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HIST1H2AJQ99878 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HIST1H2AJQ99878 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
HIST1H2AJQ99878 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.29■■□□□ 1.16
HIST1H2AJQ99878 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.29■■□□□ 1.16
HIST1H2AJQ99878 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
HIST1H2AJQ99878 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HIST1H2AJQ99878 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.28■■□□□ 1.16
HIST1H2AJQ99878 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
HIST1H2AJQ99878 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HIST1H2AJQ99878 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.28■■□□□ 1.16
HIST1H2AJQ99878 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HIST1H2AJQ99878 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HIST1H2AJQ99878 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
HIST1H2AJQ99878 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.28■■□□□ 1.16
HIST1H2AJQ99878 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms