Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.53■■□□□ 1.04
NR1H4Q96RI1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NR1H4Q96RI1 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.52■■□□□ 1.04
NR1H4Q96RI1 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NR1H4Q96RI1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
NR1H4Q96RI1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NR1H4Q96RI1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NR1H4Q96RI1 AC242852.2-201ENST00000615738 1807 ntBASIC21.52■■□□□ 1.04
NR1H4Q96RI1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NR1H4Q96RI1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
NR1H4Q96RI1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.52■■□□□ 1.03
NR1H4Q96RI1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.03
NR1H4Q96RI1 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
NR1H4Q96RI1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
NR1H4Q96RI1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
NR1H4Q96RI1 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
NR1H4Q96RI1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.51■■□□□ 1.03
NR1H4Q96RI1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NR1H4Q96RI1 AC110285.7-201ENST00000624417 1536 ntBASIC21.51■■□□□ 1.03
NR1H4Q96RI1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.51■■□□□ 1.03
NR1H4Q96RI1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.51■■□□□ 1.03
NR1H4Q96RI1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NR1H4Q96RI1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NR1H4Q96RI1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NR1H4Q96RI1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
NR1H4Q96RI1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NR1H4Q96RI1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NR1H4Q96RI1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NR1H4Q96RI1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NR1H4Q96RI1 AC073130.3-201ENST00000624389 2278 ntBASIC21.5■■□□□ 1.03
NR1H4Q96RI1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.5■■□□□ 1.03
NR1H4Q96RI1 PKD1P6-201ENST00000343738 4769 ntBASIC21.5■■□□□ 1.03
NR1H4Q96RI1 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.5■■□□□ 1.03
NR1H4Q96RI1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NR1H4Q96RI1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NR1H4Q96RI1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
NR1H4Q96RI1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NR1H4Q96RI1 AC092068.2-201ENST00000590491 1708 ntBASIC21.49■■□□□ 1.03
NR1H4Q96RI1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NR1H4Q96RI1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NR1H4Q96RI1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NR1H4Q96RI1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NR1H4Q96RI1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NR1H4Q96RI1 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
NR1H4Q96RI1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NR1H4Q96RI1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NR1H4Q96RI1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NR1H4Q96RI1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NR1H4Q96RI1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NR1H4Q96RI1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
NR1H4Q96RI1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.48■■□□□ 1.03
NR1H4Q96RI1 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
NR1H4Q96RI1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NR1H4Q96RI1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.47■■□□□ 1.03
NR1H4Q96RI1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.47■■□□□ 1.03
NR1H4Q96RI1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.47■■□□□ 1.03
NR1H4Q96RI1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.47■■□□□ 1.03
NR1H4Q96RI1 AP006261.1-201ENST00000584783 668 ntBASIC21.47■■□□□ 1.03
NR1H4Q96RI1 AC092667.1-201ENST00000434301 2586 ntBASIC21.46■■□□□ 1.03
NR1H4Q96RI1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NR1H4Q96RI1 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NR1H4Q96RI1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.46■■□□□ 1.03
NR1H4Q96RI1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.46■■□□□ 1.03
NR1H4Q96RI1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NR1H4Q96RI1 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NR1H4Q96RI1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NR1H4Q96RI1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.03
NR1H4Q96RI1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.45■■□□□ 1.02
NR1H4Q96RI1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NR1H4Q96RI1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.45■■□□□ 1.02
NR1H4Q96RI1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NR1H4Q96RI1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.45■■□□□ 1.02
NR1H4Q96RI1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NR1H4Q96RI1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NR1H4Q96RI1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
NR1H4Q96RI1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NR1H4Q96RI1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.02
NR1H4Q96RI1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
NR1H4Q96RI1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
NR1H4Q96RI1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NR1H4Q96RI1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
NR1H4Q96RI1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.45■■□□□ 1.02
NR1H4Q96RI1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.45■■□□□ 1.02
NR1H4Q96RI1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NR1H4Q96RI1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NR1H4Q96RI1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
NR1H4Q96RI1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.45■■□□□ 1.02
NR1H4Q96RI1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NR1H4Q96RI1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
NR1H4Q96RI1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NR1H4Q96RI1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NR1H4Q96RI1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NR1H4Q96RI1 HLA-L-211ENST00000482052 1765 ntBASIC21.44■■□□□ 1.02
NR1H4Q96RI1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
NR1H4Q96RI1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NR1H4Q96RI1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.44■■□□□ 1.02
NR1H4Q96RI1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
NR1H4Q96RI1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NR1H4Q96RI1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NR1H4Q96RI1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms