Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF48Q96MX3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF48Q96MX3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF48Q96MX3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF48Q96MX3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.59■□□□□ 0.57
ZNF48Q96MX3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF48Q96MX3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.59■□□□□ 0.57
ZNF48Q96MX3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.59■□□□□ 0.57
ZNF48Q96MX3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ZNF48Q96MX3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ZNF48Q96MX3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.59■□□□□ 0.57
ZNF48Q96MX3 ZNRF2P3-201ENST00000424200 374 ntBASIC18.59■□□□□ 0.57
ZNF48Q96MX3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF48Q96MX3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.59■□□□□ 0.57
ZNF48Q96MX3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.59■□□□□ 0.57
ZNF48Q96MX3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF48Q96MX3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF48Q96MX3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF48Q96MX3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF48Q96MX3 SLC6A10P-202ENST00000431994 2058 ntBASIC18.58■□□□□ 0.57
ZNF48Q96MX3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.58■□□□□ 0.56
ZNF48Q96MX3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF48Q96MX3 AC142381.2-201ENST00000566120 298 ntBASIC18.58■□□□□ 0.56
ZNF48Q96MX3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.58■□□□□ 0.56
ZNF48Q96MX3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF48Q96MX3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF48Q96MX3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.58■□□□□ 0.56
ZNF48Q96MX3 AC131274.2-201ENST00000580697 1507 ntBASIC18.58■□□□□ 0.56
ZNF48Q96MX3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF48Q96MX3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF48Q96MX3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF48Q96MX3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
ZNF48Q96MX3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
ZNF48Q96MX3 AC135279.3-201ENST00000610945 1311 ntBASIC18.57■□□□□ 0.56
ZNF48Q96MX3 AC005703.6-201ENST00000623265 1329 ntBASIC18.57■□□□□ 0.56
ZNF48Q96MX3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
ZNF48Q96MX3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF48Q96MX3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ZNF48Q96MX3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.57■□□□□ 0.56
ZNF48Q96MX3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF48Q96MX3 AC024257.2-201ENST00000549699 147 ntBASIC18.57■□□□□ 0.56
ZNF48Q96MX3 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF48Q96MX3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF48Q96MX3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF48Q96MX3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.57■□□□□ 0.56
ZNF48Q96MX3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF48Q96MX3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF48Q96MX3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.56■□□□□ 0.56
ZNF48Q96MX3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.56■□□□□ 0.56
ZNF48Q96MX3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ZNF48Q96MX3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.56■□□□□ 0.56
ZNF48Q96MX3 SUDS3P1-201ENST00000505831 966 ntBASIC18.56■□□□□ 0.56
ZNF48Q96MX3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.56■□□□□ 0.56
ZNF48Q96MX3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF48Q96MX3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF48Q96MX3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF48Q96MX3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF48Q96MX3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ZNF48Q96MX3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.55■□□□□ 0.56
ZNF48Q96MX3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF48Q96MX3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF48Q96MX3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF48Q96MX3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF48Q96MX3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF48Q96MX3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF48Q96MX3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF48Q96MX3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF48Q96MX3 AC138932.3-201ENST00000567634 1902 ntBASIC18.55■□□□□ 0.56
ZNF48Q96MX3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF48Q96MX3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF48Q96MX3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF48Q96MX3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF48Q96MX3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF48Q96MX3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.54■□□□□ 0.56
ZNF48Q96MX3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF48Q96MX3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.54■□□□□ 0.56
ZNF48Q96MX3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF48Q96MX3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF48Q96MX3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF48Q96MX3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF48Q96MX3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF48Q96MX3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.54■□□□□ 0.56
ZNF48Q96MX3 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.54■□□□□ 0.56
ZNF48Q96MX3 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.54■□□□□ 0.56
ZNF48Q96MX3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.54■□□□□ 0.56
ZNF48Q96MX3 AP003733.4-201ENST00000623785 1697 ntBASIC18.54■□□□□ 0.56
ZNF48Q96MX3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF48Q96MX3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF48Q96MX3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF48Q96MX3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF48Q96MX3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF48Q96MX3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.53■□□□□ 0.56
ZNF48Q96MX3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ZNF48Q96MX3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF48Q96MX3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF48Q96MX3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF48Q96MX3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF48Q96MX3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.52■□□□□ 0.56
ZNF48Q96MX3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF48Q96MX3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms