Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RITA1Q96K30 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RITA1Q96K30 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RITA1Q96K30 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.39■□□□□ 0.53
RITA1Q96K30 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RITA1Q96K30 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RITA1Q96K30 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RITA1Q96K30 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.38■□□□□ 0.53
RITA1Q96K30 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RITA1Q96K30 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.38■□□□□ 0.53
RITA1Q96K30 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RITA1Q96K30 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RITA1Q96K30 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.38■□□□□ 0.53
RITA1Q96K30 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RITA1Q96K30 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.38■□□□□ 0.53
RITA1Q96K30 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.38■□□□□ 0.53
RITA1Q96K30 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RITA1Q96K30 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RITA1Q96K30 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.38■□□□□ 0.53
RITA1Q96K30 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.37■□□□□ 0.53
RITA1Q96K30 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.37■□□□□ 0.53
RITA1Q96K30 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.37■□□□□ 0.53
RITA1Q96K30 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.37■□□□□ 0.53
RITA1Q96K30 AL451085.2-201ENST00000605085 799 ntBASIC18.37■□□□□ 0.53
RITA1Q96K30 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RITA1Q96K30 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RITA1Q96K30 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RITA1Q96K30 AL161729.1-201ENST00000604104 1402 ntBASIC18.37■□□□□ 0.53
RITA1Q96K30 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RITA1Q96K30 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.37■□□□□ 0.53
RITA1Q96K30 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RITA1Q96K30 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.37■□□□□ 0.53
RITA1Q96K30 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RITA1Q96K30 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RITA1Q96K30 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RITA1Q96K30 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RITA1Q96K30 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.37■□□□□ 0.53
RITA1Q96K30 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RITA1Q96K30 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RITA1Q96K30 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RITA1Q96K30 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RITA1Q96K30 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RITA1Q96K30 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RITA1Q96K30 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RITA1Q96K30 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RITA1Q96K30 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.36■□□□□ 0.53
RITA1Q96K30 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
RITA1Q96K30 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RITA1Q96K30 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.36■□□□□ 0.53
RITA1Q96K30 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RITA1Q96K30 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.35■□□□□ 0.53
RITA1Q96K30 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.35■□□□□ 0.53
RITA1Q96K30 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RITA1Q96K30 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RITA1Q96K30 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RITA1Q96K30 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RITA1Q96K30 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.35■□□□□ 0.53
RITA1Q96K30 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.35■□□□□ 0.53
RITA1Q96K30 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.35■□□□□ 0.53
RITA1Q96K30 AC004448.1-201ENST00000458332 883 ntBASIC18.35■□□□□ 0.53
RITA1Q96K30 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.35■□□□□ 0.53
RITA1Q96K30 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RITA1Q96K30 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RITA1Q96K30 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RITA1Q96K30 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RITA1Q96K30 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RITA1Q96K30 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.35■□□□□ 0.53
RITA1Q96K30 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RITA1Q96K30 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RITA1Q96K30 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RITA1Q96K30 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.34■□□□□ 0.53
RITA1Q96K30 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RITA1Q96K30 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RITA1Q96K30 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.34■□□□□ 0.53
RITA1Q96K30 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.34■□□□□ 0.53
RITA1Q96K30 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.34■□□□□ 0.53
RITA1Q96K30 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RITA1Q96K30 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RITA1Q96K30 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RITA1Q96K30 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RITA1Q96K30 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.34■□□□□ 0.53
RITA1Q96K30 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RITA1Q96K30 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RITA1Q96K30 AC021242.3-201ENST00000607598 1377 ntBASIC18.33■□□□□ 0.53
RITA1Q96K30 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RITA1Q96K30 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.33■□□□□ 0.52
RITA1Q96K30 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.33■□□□□ 0.52
RITA1Q96K30 AC009299.2-201ENST00000482477 511 ntBASIC18.33■□□□□ 0.52
RITA1Q96K30 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RITA1Q96K30 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RITA1Q96K30 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.33■□□□□ 0.52
RITA1Q96K30 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RITA1Q96K30 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.33■□□□□ 0.52
RITA1Q96K30 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RITA1Q96K30 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RITA1Q96K30 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RITA1Q96K30 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RITA1Q96K30 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RITA1Q96K30 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RITA1Q96K30 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms