Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF183Q96D59 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF183Q96D59 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF183Q96D59 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
RNF183Q96D59 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF183Q96D59 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC16.83■□□□□ 0.28
RNF183Q96D59 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF183Q96D59 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.83■□□□□ 0.28
RNF183Q96D59 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF183Q96D59 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF183Q96D59 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RNF183Q96D59 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC16.82■□□□□ 0.28
RNF183Q96D59 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF183Q96D59 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC16.82■□□□□ 0.28
RNF183Q96D59 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC16.82■□□□□ 0.28
RNF183Q96D59 TFPT-201ENST00000391757 774 ntTSL 5 BASIC16.82■□□□□ 0.28
RNF183Q96D59 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF183Q96D59 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RNF183Q96D59 AK3-203ENST00000447596 705 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF183Q96D59 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.82■□□□□ 0.28
RNF183Q96D59 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RNF183Q96D59 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RNF183Q96D59 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF183Q96D59 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF183Q96D59 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC16.81■□□□□ 0.28
RNF183Q96D59 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC16.81■□□□□ 0.28
RNF183Q96D59 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF183Q96D59 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF183Q96D59 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.81■□□□□ 0.28
RNF183Q96D59 AC004448.1-201ENST00000458332 883 ntBASIC16.81■□□□□ 0.28
RNF183Q96D59 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF183Q96D59 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF183Q96D59 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC16.81■□□□□ 0.28
RNF183Q96D59 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF183Q96D59 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF183Q96D59 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC16.81■□□□□ 0.28
RNF183Q96D59 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF183Q96D59 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF183Q96D59 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF183Q96D59 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RNF183Q96D59 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF183Q96D59 AC131281.2-201ENST00000520478 145 ntBASIC16.8■□□□□ 0.28
RNF183Q96D59 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF183Q96D59 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC16.8■□□□□ 0.28
RNF183Q96D59 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF183Q96D59 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF183Q96D59 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF183Q96D59 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RNF183Q96D59 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF183Q96D59 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF183Q96D59 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF183Q96D59 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF183Q96D59 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF183Q96D59 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF183Q96D59 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF183Q96D59 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF183Q96D59 CLTA-206ENST00000466396 695 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF183Q96D59 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF183Q96D59 AC133561.1-201ENST00000568600 2415 ntBASIC16.79■□□□□ 0.28
RNF183Q96D59 AC019069.1-201ENST00000610008 1333 ntBASIC16.78■□□□□ 0.28
RNF183Q96D59 STK32C-205ENST00000456004 607 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF183Q96D59 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RNF183Q96D59 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF183Q96D59 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF183Q96D59 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RNF183Q96D59 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF183Q96D59 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
RNF183Q96D59 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF183Q96D59 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF183Q96D59 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF183Q96D59 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.77■□□□□ 0.28
RNF183Q96D59 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.77■□□□□ 0.28
RNF183Q96D59 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
RNF183Q96D59 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RNF183Q96D59 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
RNF183Q96D59 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF183Q96D59 LSR-205ENST00000427250 1606 ntTSL 2 BASIC16.77■□□□□ 0.27
RNF183Q96D59 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
RNF183Q96D59 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF183Q96D59 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RNF183Q96D59 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC16.77■□□□□ 0.27
RNF183Q96D59 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF183Q96D59 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RNF183Q96D59 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF183Q96D59 THRA-202ENST00000394121 2260 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF183Q96D59 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF183Q96D59 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF183Q96D59 AL136116.3-201ENST00000402907 1138 ntBASIC16.76■□□□□ 0.27
RNF183Q96D59 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF183Q96D59 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.76■□□□□ 0.27
RNF183Q96D59 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC16.76■□□□□ 0.27
RNF183Q96D59 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.76■□□□□ 0.27
RNF183Q96D59 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF183Q96D59 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC16.76■□□□□ 0.27
RNF183Q96D59 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
RNF183Q96D59 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RNF183Q96D59 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF183Q96D59 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF183Q96D59 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF183Q96D59 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms