Protein–RNA interactions for Protein: Q96BD0

SLCO4A1, Solute carrier organic anion transporter family member 4A1, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLCO4A1Q96BD0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLCO4A1Q96BD0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
SLCO4A1Q96BD0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SLCO4A1Q96BD0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SLCO4A1Q96BD0 AL024507.2-201ENST00000606070 2574 ntBASIC21.52■■□□□ 1.04
SLCO4A1Q96BD0 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
SLCO4A1Q96BD0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLCO4A1Q96BD0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
SLCO4A1Q96BD0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLCO4A1Q96BD0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.51■■□□□ 1.03
SLCO4A1Q96BD0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.51■■□□□ 1.03
SLCO4A1Q96BD0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SLCO4A1Q96BD0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.51■■□□□ 1.03
SLCO4A1Q96BD0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.51■■□□□ 1.03
SLCO4A1Q96BD0 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
SLCO4A1Q96BD0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLCO4A1Q96BD0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.51■■□□□ 1.03
SLCO4A1Q96BD0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.51■■□□□ 1.03
SLCO4A1Q96BD0 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
SLCO4A1Q96BD0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SLCO4A1Q96BD0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.5■■□□□ 1.03
SLCO4A1Q96BD0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLCO4A1Q96BD0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
SLCO4A1Q96BD0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.5■■□□□ 1.03
SLCO4A1Q96BD0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.5■■□□□ 1.03
SLCO4A1Q96BD0 AC016575.1-201ENST00000607026 382 ntBASIC21.5■■□□□ 1.03
SLCO4A1Q96BD0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLCO4A1Q96BD0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.5■■□□□ 1.03
SLCO4A1Q96BD0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLCO4A1Q96BD0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLCO4A1Q96BD0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLCO4A1Q96BD0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLCO4A1Q96BD0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLCO4A1Q96BD0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLCO4A1Q96BD0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.49■■□□□ 1.03
SLCO4A1Q96BD0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLCO4A1Q96BD0 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.48■■□□□ 1.03
SLCO4A1Q96BD0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SLCO4A1Q96BD0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLCO4A1Q96BD0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.48■■□□□ 1.03
SLCO4A1Q96BD0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.48■■□□□ 1.03
SLCO4A1Q96BD0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.48■■□□□ 1.03
SLCO4A1Q96BD0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SLCO4A1Q96BD0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLCO4A1Q96BD0 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
SLCO4A1Q96BD0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SLCO4A1Q96BD0 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLCO4A1Q96BD0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLCO4A1Q96BD0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SLCO4A1Q96BD0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLCO4A1Q96BD0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLCO4A1Q96BD0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.47■■□□□ 1.03
SLCO4A1Q96BD0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.47■■□□□ 1.03
SLCO4A1Q96BD0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLCO4A1Q96BD0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLCO4A1Q96BD0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SLCO4A1Q96BD0 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.46■■□□□ 1.03
SLCO4A1Q96BD0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
SLCO4A1Q96BD0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.46■■□□□ 1.03
SLCO4A1Q96BD0 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.45■■□□□ 1.02
SLCO4A1Q96BD0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLCO4A1Q96BD0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLCO4A1Q96BD0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLCO4A1Q96BD0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLCO4A1Q96BD0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.45■■□□□ 1.02
SLCO4A1Q96BD0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLCO4A1Q96BD0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SLCO4A1Q96BD0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLCO4A1Q96BD0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SLCO4A1Q96BD0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
SLCO4A1Q96BD0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLCO4A1Q96BD0 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.44■■□□□ 1.02
SLCO4A1Q96BD0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SLCO4A1Q96BD0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SLCO4A1Q96BD0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
SLCO4A1Q96BD0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
SLCO4A1Q96BD0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLCO4A1Q96BD0 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLCO4A1Q96BD0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLCO4A1Q96BD0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
SLCO4A1Q96BD0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLCO4A1Q96BD0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLCO4A1Q96BD0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLCO4A1Q96BD0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.43■■□□□ 1.02
SLCO4A1Q96BD0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.43■■□□□ 1.02
SLCO4A1Q96BD0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.43■■□□□ 1.02
SLCO4A1Q96BD0 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.43■■□□□ 1.02
SLCO4A1Q96BD0 SMPD5-203ENST00000639008 1464 ntBASIC21.43■■□□□ 1.02
SLCO4A1Q96BD0 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLCO4A1Q96BD0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.43■■□□□ 1.02
SLCO4A1Q96BD0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLCO4A1Q96BD0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.43■■□□□ 1.02
SLCO4A1Q96BD0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLCO4A1Q96BD0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
SLCO4A1Q96BD0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
SLCO4A1Q96BD0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLCO4A1Q96BD0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLCO4A1Q96BD0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.42■■□□□ 1.02
SLCO4A1Q96BD0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SLCO4A1Q96BD0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms