Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC30.01■■■□□ 2.39
RTF1Q92541 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
RTF1Q92541 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
RTF1Q92541 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC30.01■■■□□ 2.39
RTF1Q92541 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.39
RTF1Q92541 AC142381.3-201ENST00000568208 1670 ntBASIC30.01■■■□□ 2.39
RTF1Q92541 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC30.01■■■□□ 2.39
RTF1Q92541 SHF-207ENST00000560540 2062 ntTSL 5 BASIC30■■■□□ 2.39
RTF1Q92541 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC30■■■□□ 2.39
RTF1Q92541 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
RTF1Q92541 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
RTF1Q92541 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC30■■■□□ 2.39
RTF1Q92541 AC096631.2-201ENST00000436136 790 ntBASIC30■■■□□ 2.39
RTF1Q92541 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC30■■■□□ 2.39
RTF1Q92541 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC30■■■□□ 2.39
RTF1Q92541 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
RTF1Q92541 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
RTF1Q92541 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC29.99■■■□□ 2.39
RTF1Q92541 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
RTF1Q92541 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
RTF1Q92541 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
RTF1Q92541 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
RTF1Q92541 AC138932.3-201ENST00000567634 1902 ntBASIC29.98■■■□□ 2.39
RTF1Q92541 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
RTF1Q92541 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
RTF1Q92541 SRD5A1P1-201ENST00000442297 786 ntBASIC29.98■■■□□ 2.39
RTF1Q92541 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
RTF1Q92541 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC29.98■■■□□ 2.39
RTF1Q92541 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
RTF1Q92541 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
RTF1Q92541 AC110285.6-201ENST00000617652 491 ntBASIC29.97■■■□□ 2.39
RTF1Q92541 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC29.96■■■□□ 2.39
RTF1Q92541 MED17-227ENST00000640521 2047 ntTSL 5 BASIC29.96■■■□□ 2.39
RTF1Q92541 AC020928.2-201ENST00000588717 2197 ntBASIC29.96■■■□□ 2.39
RTF1Q92541 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC29.96■■■□□ 2.39
RTF1Q92541 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC29.96■■■□□ 2.39
RTF1Q92541 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
RTF1Q92541 MIR638-201ENST00000385237 100 ntBASIC29.96■■■□□ 2.39
RTF1Q92541 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC29.96■■■□□ 2.39
RTF1Q92541 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC29.96■■■□□ 2.39
RTF1Q92541 AC135731.1-201ENST00000569415 2548 ntBASIC29.96■■■□□ 2.39
RTF1Q92541 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC29.96■■■□□ 2.39
RTF1Q92541 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC29.96■■■□□ 2.39
RTF1Q92541 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC29.96■■■□□ 2.39
RTF1Q92541 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC29.96■■■□□ 2.39
RTF1Q92541 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC29.95■■■□□ 2.39
RTF1Q92541 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC29.95■■■□□ 2.39
RTF1Q92541 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
RTF1Q92541 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC29.94■■■□□ 2.38
RTF1Q92541 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
RTF1Q92541 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC29.94■■■□□ 2.38
RTF1Q92541 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC29.94■■■□□ 2.38
RTF1Q92541 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC29.94■■■□□ 2.38
RTF1Q92541 GATM-206ENST00000558336 1522 ntTSL 2 BASIC29.94■■■□□ 2.38
RTF1Q92541 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
RTF1Q92541 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC29.93■■■□□ 2.38
RTF1Q92541 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC29.93■■■□□ 2.38
RTF1Q92541 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC29.93■■■□□ 2.38
RTF1Q92541 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC29.93■■■□□ 2.38
RTF1Q92541 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC29.93■■■□□ 2.38
RTF1Q92541 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
RTF1Q92541 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC29.93■■■□□ 2.38
RTF1Q92541 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC29.93■■■□□ 2.38
RTF1Q92541 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
RTF1Q92541 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
RTF1Q92541 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
RTF1Q92541 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
RTF1Q92541 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
RTF1Q92541 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
RTF1Q92541 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
RTF1Q92541 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
RTF1Q92541 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC29.91■■■□□ 2.38
RTF1Q92541 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC29.91■■■□□ 2.38
RTF1Q92541 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC29.91■■■□□ 2.38
RTF1Q92541 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
RTF1Q92541 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC29.91■■■□□ 2.38
RTF1Q92541 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC29.91■■■□□ 2.38
RTF1Q92541 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
RTF1Q92541 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
RTF1Q92541 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
RTF1Q92541 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC29.9■■■□□ 2.38
RTF1Q92541 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
RTF1Q92541 TMEM202-AS1-202ENST00000565181 2325 ntBASIC29.9■■■□□ 2.38
RTF1Q92541 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
RTF1Q92541 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC29.9■■■□□ 2.38
RTF1Q92541 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
RTF1Q92541 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC29.9■■■□□ 2.38
RTF1Q92541 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
RTF1Q92541 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
RTF1Q92541 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
RTF1Q92541 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
RTF1Q92541 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
RTF1Q92541 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC29.89■■■□□ 2.38
RTF1Q92541 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC29.89■■■□□ 2.38
RTF1Q92541 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
RTF1Q92541 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC29.89■■■□□ 2.38
RTF1Q92541 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
RTF1Q92541 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC29.88■■■□□ 2.37
RTF1Q92541 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
RTF1Q92541 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC29.88■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms