Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTN4IP1Q8WWV3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RTN4IP1Q8WWV3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
RTN4IP1Q8WWV3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4IP1Q8WWV3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RTN4IP1Q8WWV3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4IP1Q8WWV3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4IP1Q8WWV3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.15■□□□□ 0.66
RTN4IP1Q8WWV3 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.15■□□□□ 0.66
RTN4IP1Q8WWV3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4IP1Q8WWV3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4IP1Q8WWV3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.15■□□□□ 0.66
RTN4IP1Q8WWV3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4IP1Q8WWV3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.15■□□□□ 0.66
RTN4IP1Q8WWV3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4IP1Q8WWV3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4IP1Q8WWV3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RTN4IP1Q8WWV3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
RTN4IP1Q8WWV3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RTN4IP1Q8WWV3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RTN4IP1Q8WWV3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.14■□□□□ 0.66
RTN4IP1Q8WWV3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN4IP1Q8WWV3 AL117328.2-201ENST00000624617 1940 ntBASIC19.14■□□□□ 0.65
RTN4IP1Q8WWV3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN4IP1Q8WWV3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN4IP1Q8WWV3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTN4IP1Q8WWV3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN4IP1Q8WWV3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN4IP1Q8WWV3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RTN4IP1Q8WWV3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTN4IP1Q8WWV3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTN4IP1Q8WWV3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTN4IP1Q8WWV3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.13■□□□□ 0.65
RTN4IP1Q8WWV3 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.13■□□□□ 0.65
RTN4IP1Q8WWV3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.13■□□□□ 0.65
RTN4IP1Q8WWV3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
RTN4IP1Q8WWV3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.13■□□□□ 0.65
RTN4IP1Q8WWV3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTN4IP1Q8WWV3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTN4IP1Q8WWV3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTN4IP1Q8WWV3 FOXO3B-201ENST00000395675 1928 ntBASIC19.13■□□□□ 0.65
RTN4IP1Q8WWV3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTN4IP1Q8WWV3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.13■□□□□ 0.65
RTN4IP1Q8WWV3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTN4IP1Q8WWV3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTN4IP1Q8WWV3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.12■□□□□ 0.65
RTN4IP1Q8WWV3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTN4IP1Q8WWV3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.12■□□□□ 0.65
RTN4IP1Q8WWV3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTN4IP1Q8WWV3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTN4IP1Q8WWV3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTN4IP1Q8WWV3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RTN4IP1Q8WWV3 DUX4L18-201ENST00000553347 1267 ntBASIC19.12■□□□□ 0.65
RTN4IP1Q8WWV3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTN4IP1Q8WWV3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTN4IP1Q8WWV3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RTN4IP1Q8WWV3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN4IP1Q8WWV3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN4IP1Q8WWV3 CLDN5-201ENST00000403084 2357 ntBASIC19.11■□□□□ 0.65
RTN4IP1Q8WWV3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN4IP1Q8WWV3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RTN4IP1Q8WWV3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.11■□□□□ 0.65
RTN4IP1Q8WWV3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN4IP1Q8WWV3 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN4IP1Q8WWV3 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN4IP1Q8WWV3 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.11■□□□□ 0.65
RTN4IP1Q8WWV3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN4IP1Q8WWV3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RTN4IP1Q8WWV3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN4IP1Q8WWV3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN4IP1Q8WWV3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN4IP1Q8WWV3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RTN4IP1Q8WWV3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTN4IP1Q8WWV3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTN4IP1Q8WWV3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTN4IP1Q8WWV3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTN4IP1Q8WWV3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
RTN4IP1Q8WWV3 AC004987.1-201ENST00000428627 508 ntBASIC19.1■□□□□ 0.65
RTN4IP1Q8WWV3 ATP5G2P3-201ENST00000429083 425 ntBASIC19.1■□□□□ 0.65
RTN4IP1Q8WWV3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.1■□□□□ 0.65
RTN4IP1Q8WWV3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTN4IP1Q8WWV3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.1■□□□□ 0.65
RTN4IP1Q8WWV3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
RTN4IP1Q8WWV3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RTN4IP1Q8WWV3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RTN4IP1Q8WWV3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.09■□□□□ 0.65
RTN4IP1Q8WWV3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTN4IP1Q8WWV3 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.09■□□□□ 0.65
RTN4IP1Q8WWV3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RTN4IP1Q8WWV3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTN4IP1Q8WWV3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTN4IP1Q8WWV3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTN4IP1Q8WWV3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTN4IP1Q8WWV3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.08■□□□□ 0.65
RTN4IP1Q8WWV3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
RTN4IP1Q8WWV3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTN4IP1Q8WWV3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTN4IP1Q8WWV3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTN4IP1Q8WWV3 TSPY13P-201ENST00000338964 914 ntBASIC19.08■□□□□ 0.64
RTN4IP1Q8WWV3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms