Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.39■■□□□ 1.33
CHD5Q8TDI0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.39■■□□□ 1.33
CHD5Q8TDI0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CHD5Q8TDI0 AL117332.1-201ENST00000622628 974 ntBASIC23.39■■□□□ 1.33
CHD5Q8TDI0 TSPY9P-201ENST00000440215 945 ntBASIC23.38■■□□□ 1.33
CHD5Q8TDI0 TSPY11P-201ENST00000442607 1045 ntBASIC23.38■■□□□ 1.33
CHD5Q8TDI0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
CHD5Q8TDI0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CHD5Q8TDI0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.38■■□□□ 1.33
CHD5Q8TDI0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CHD5Q8TDI0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CHD5Q8TDI0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.38■■□□□ 1.33
CHD5Q8TDI0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHD5Q8TDI0 AC004812.2-201ENST00000611079 2094 ntBASIC23.37■■□□□ 1.33
CHD5Q8TDI0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHD5Q8TDI0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.35■■□□□ 1.33
CHD5Q8TDI0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHD5Q8TDI0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHD5Q8TDI0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
CHD5Q8TDI0 MIR3621-201ENST00000580529 85 ntBASIC23.35■■□□□ 1.33
CHD5Q8TDI0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
CHD5Q8TDI0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
CHD5Q8TDI0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CHD5Q8TDI0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CHD5Q8TDI0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHD5Q8TDI0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
CHD5Q8TDI0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
CHD5Q8TDI0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
CHD5Q8TDI0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.34■■□□□ 1.33
CHD5Q8TDI0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.34■■□□□ 1.33
CHD5Q8TDI0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CHD5Q8TDI0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHD5Q8TDI0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHD5Q8TDI0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.34■■□□□ 1.33
CHD5Q8TDI0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.34■■□□□ 1.33
CHD5Q8TDI0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.34■■□□□ 1.33
CHD5Q8TDI0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHD5Q8TDI0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.33■■□□□ 1.33
CHD5Q8TDI0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CHD5Q8TDI0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.33■■□□□ 1.33
CHD5Q8TDI0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CHD5Q8TDI0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CHD5Q8TDI0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHD5Q8TDI0 AC005703.6-201ENST00000623265 1329 ntBASIC23.32■■□□□ 1.32
CHD5Q8TDI0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHD5Q8TDI0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.32■■□□□ 1.32
CHD5Q8TDI0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
CHD5Q8TDI0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHD5Q8TDI0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHD5Q8TDI0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CHD5Q8TDI0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHD5Q8TDI0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
CHD5Q8TDI0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CHD5Q8TDI0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CHD5Q8TDI0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CHD5Q8TDI0 AC093323.1-202ENST00000635031 2045 ntBASIC23.31■■□□□ 1.32
CHD5Q8TDI0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CHD5Q8TDI0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CHD5Q8TDI0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.31■■□□□ 1.32
CHD5Q8TDI0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CHD5Q8TDI0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.31■■□□□ 1.32
CHD5Q8TDI0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD5Q8TDI0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.3■■□□□ 1.32
CHD5Q8TDI0 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.3■■□□□ 1.32
CHD5Q8TDI0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CHD5Q8TDI0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHD5Q8TDI0 ABCB10P4-201ENST00000566803 2184 ntBASIC23.29■■□□□ 1.32
CHD5Q8TDI0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHD5Q8TDI0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.29■■□□□ 1.32
CHD5Q8TDI0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.29■■□□□ 1.32
CHD5Q8TDI0 MIR4466-201ENST00000606121 54 ntBASIC23.29■■□□□ 1.32
CHD5Q8TDI0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHD5Q8TDI0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CHD5Q8TDI0 ALDH1A3-203ENST00000557963 1670 ntBASIC23.29■■□□□ 1.32
CHD5Q8TDI0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHD5Q8TDI0 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.29■■□□□ 1.32
CHD5Q8TDI0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.28■■□□□ 1.32
CHD5Q8TDI0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
CHD5Q8TDI0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
CHD5Q8TDI0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms