Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
HMGCLL1Q8TB92 HLA-L-211ENST00000482052 1765 ntBASIC22.5■■□□□ 1.19
HMGCLL1Q8TB92 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
HMGCLL1Q8TB92 AF131216.4-201ENST00000638924 1588 ntBASIC22.5■■□□□ 1.19
HMGCLL1Q8TB92 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.49■■□□□ 1.19
HMGCLL1Q8TB92 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
HMGCLL1Q8TB92 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
HMGCLL1Q8TB92 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.49■■□□□ 1.19
HMGCLL1Q8TB92 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
HMGCLL1Q8TB92 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.49■■□□□ 1.19
HMGCLL1Q8TB92 C9orf163-202ENST00000624034 2573 ntBASIC22.49■■□□□ 1.19
HMGCLL1Q8TB92 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
HMGCLL1Q8TB92 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.49■■□□□ 1.19
HMGCLL1Q8TB92 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
HMGCLL1Q8TB92 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HMGCLL1Q8TB92 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HMGCLL1Q8TB92 Z92544.1-202ENST00000571933 1220 ntBASIC22.48■■□□□ 1.19
HMGCLL1Q8TB92 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HMGCLL1Q8TB92 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
HMGCLL1Q8TB92 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.48■■□□□ 1.19
HMGCLL1Q8TB92 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HMGCLL1Q8TB92 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HMGCLL1Q8TB92 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.47■■□□□ 1.19
HMGCLL1Q8TB92 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.47■■□□□ 1.19
HMGCLL1Q8TB92 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
HMGCLL1Q8TB92 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.47■■□□□ 1.19
HMGCLL1Q8TB92 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
HMGCLL1Q8TB92 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
HMGCLL1Q8TB92 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.47■■□□□ 1.19
HMGCLL1Q8TB92 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
HMGCLL1Q8TB92 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
HMGCLL1Q8TB92 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
HMGCLL1Q8TB92 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HMGCLL1Q8TB92 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HMGCLL1Q8TB92 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
HMGCLL1Q8TB92 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
HMGCLL1Q8TB92 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
HMGCLL1Q8TB92 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.46■■□□□ 1.19
HMGCLL1Q8TB92 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
HMGCLL1Q8TB92 RNF146-205ENST00000477776 762 ntTSL 3 BASIC22.46■■□□□ 1.19
HMGCLL1Q8TB92 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.46■■□□□ 1.19
HMGCLL1Q8TB92 AL035685.1-201ENST00000636663 812 ntBASIC22.46■■□□□ 1.19
HMGCLL1Q8TB92 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
HMGCLL1Q8TB92 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
HMGCLL1Q8TB92 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
HMGCLL1Q8TB92 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HMGCLL1Q8TB92 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HMGCLL1Q8TB92 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
HMGCLL1Q8TB92 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HMGCLL1Q8TB92 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
HMGCLL1Q8TB92 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.45■■□□□ 1.18
HMGCLL1Q8TB92 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
HMGCLL1Q8TB92 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HMGCLL1Q8TB92 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.45■■□□□ 1.18
HMGCLL1Q8TB92 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
HMGCLL1Q8TB92 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
HMGCLL1Q8TB92 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.45■■□□□ 1.18
HMGCLL1Q8TB92 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
HMGCLL1Q8TB92 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
HMGCLL1Q8TB92 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.44■■□□□ 1.18
HMGCLL1Q8TB92 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
HMGCLL1Q8TB92 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HMGCLL1Q8TB92 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
HMGCLL1Q8TB92 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
HMGCLL1Q8TB92 BX664725.1-201ENST00000438252 379 ntBASIC22.44■■□□□ 1.18
HMGCLL1Q8TB92 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HMGCLL1Q8TB92 AC021242.3-201ENST00000607598 1377 ntBASIC22.44■■□□□ 1.18
HMGCLL1Q8TB92 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
HMGCLL1Q8TB92 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HMGCLL1Q8TB92 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
HMGCLL1Q8TB92 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
HMGCLL1Q8TB92 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HMGCLL1Q8TB92 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.43■■□□□ 1.18
HMGCLL1Q8TB92 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.43■■□□□ 1.18
HMGCLL1Q8TB92 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HMGCLL1Q8TB92 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
HMGCLL1Q8TB92 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.43■■□□□ 1.18
HMGCLL1Q8TB92 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
HMGCLL1Q8TB92 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HMGCLL1Q8TB92 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
HMGCLL1Q8TB92 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
HMGCLL1Q8TB92 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC22.42■■□□□ 1.18
HMGCLL1Q8TB92 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
HMGCLL1Q8TB92 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.42■■□□□ 1.18
HMGCLL1Q8TB92 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.42■■□□□ 1.18
HMGCLL1Q8TB92 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
HMGCLL1Q8TB92 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
HMGCLL1Q8TB92 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
HMGCLL1Q8TB92 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
HMGCLL1Q8TB92 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HMGCLL1Q8TB92 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
HMGCLL1Q8TB92 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
HMGCLL1Q8TB92 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.41■■□□□ 1.18
HMGCLL1Q8TB92 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.41■■□□□ 1.18
HMGCLL1Q8TB92 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HMGCLL1Q8TB92 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
HMGCLL1Q8TB92 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
HMGCLL1Q8TB92 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
HMGCLL1Q8TB92 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
HMGCLL1Q8TB92 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms