Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNIP1Q8TAD8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SNIP1Q8TAD8 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SNIP1Q8TAD8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
SNIP1Q8TAD8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.66■■□□□ 1.06
SNIP1Q8TAD8 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
SNIP1Q8TAD8 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNIP1Q8TAD8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.66■■□□□ 1.06
SNIP1Q8TAD8 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.66■■□□□ 1.06
SNIP1Q8TAD8 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.66■■□□□ 1.06
SNIP1Q8TAD8 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.66■■□□□ 1.06
SNIP1Q8TAD8 AL031602.1-201ENST00000633169 911 ntBASIC21.66■■□□□ 1.06
SNIP1Q8TAD8 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNIP1Q8TAD8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNIP1Q8TAD8 DUX4L2-201ENST00000561772 1275 ntBASIC21.65■■□□□ 1.06
SNIP1Q8TAD8 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.65■■□□□ 1.06
SNIP1Q8TAD8 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.65■■□□□ 1.06
SNIP1Q8TAD8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.65■■□□□ 1.06
SNIP1Q8TAD8 DUX4L6-201ENST00000626483 1275 ntBASIC21.65■■□□□ 1.06
SNIP1Q8TAD8 DUX4L1-201ENST00000627662 1275 ntBASIC21.65■■□□□ 1.06
SNIP1Q8TAD8 DUX4L8-201ENST00000629013 1275 ntBASIC21.65■■□□□ 1.06
SNIP1Q8TAD8 DUX4L3-201ENST00000630187 1275 ntBASIC21.65■■□□□ 1.06
SNIP1Q8TAD8 DUX4L7-201ENST00000630678 1275 ntBASIC21.65■■□□□ 1.06
SNIP1Q8TAD8 DUX4L5-201ENST00000630834 1275 ntBASIC21.65■■□□□ 1.06
SNIP1Q8TAD8 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNIP1Q8TAD8 AC009102.2-201ENST00000606772 1639 ntBASIC21.65■■□□□ 1.06
SNIP1Q8TAD8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.64■■□□□ 1.06
SNIP1Q8TAD8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SNIP1Q8TAD8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.64■■□□□ 1.06
SNIP1Q8TAD8 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SNIP1Q8TAD8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNIP1Q8TAD8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNIP1Q8TAD8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNIP1Q8TAD8 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SNIP1Q8TAD8 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
SNIP1Q8TAD8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.63■■□□□ 1.05
SNIP1Q8TAD8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.63■■□□□ 1.05
SNIP1Q8TAD8 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.63■■□□□ 1.05
SNIP1Q8TAD8 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.63■■□□□ 1.05
SNIP1Q8TAD8 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNIP1Q8TAD8 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SNIP1Q8TAD8 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNIP1Q8TAD8 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNIP1Q8TAD8 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNIP1Q8TAD8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNIP1Q8TAD8 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNIP1Q8TAD8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNIP1Q8TAD8 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNIP1Q8TAD8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SNIP1Q8TAD8 AC004911.1-201ENST00000416316 871 ntBASIC21.62■■□□□ 1.05
SNIP1Q8TAD8 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.62■■□□□ 1.05
SNIP1Q8TAD8 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNIP1Q8TAD8 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNIP1Q8TAD8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.62■■□□□ 1.05
SNIP1Q8TAD8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNIP1Q8TAD8 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNIP1Q8TAD8 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNIP1Q8TAD8 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SNIP1Q8TAD8 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SNIP1Q8TAD8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SNIP1Q8TAD8 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.61■■□□□ 1.05
SNIP1Q8TAD8 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.61■■□□□ 1.05
SNIP1Q8TAD8 C17orf82-201ENST00000623772 1530 ntBASIC21.61■■□□□ 1.05
SNIP1Q8TAD8 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.61■■□□□ 1.05
SNIP1Q8TAD8 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SNIP1Q8TAD8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.61■■□□□ 1.05
SNIP1Q8TAD8 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SNIP1Q8TAD8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SNIP1Q8TAD8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SNIP1Q8TAD8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.6■■□□□ 1.05
SNIP1Q8TAD8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
SNIP1Q8TAD8 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
SNIP1Q8TAD8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.6■■□□□ 1.05
SNIP1Q8TAD8 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SNIP1Q8TAD8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SNIP1Q8TAD8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.6■■□□□ 1.05
SNIP1Q8TAD8 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.6■■□□□ 1.05
SNIP1Q8TAD8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SNIP1Q8TAD8 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.6■■□□□ 1.05
SNIP1Q8TAD8 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SNIP1Q8TAD8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SNIP1Q8TAD8 AC142086.6-201ENST00000621154 1765 ntBASIC21.59■■□□□ 1.05
SNIP1Q8TAD8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
SNIP1Q8TAD8 AC123595.1-201ENST00000440769 1046 ntBASIC21.59■■□□□ 1.05
SNIP1Q8TAD8 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SNIP1Q8TAD8 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.59■■□□□ 1.05
SNIP1Q8TAD8 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SNIP1Q8TAD8 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.59■■□□□ 1.05
SNIP1Q8TAD8 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.58■■□□□ 1.05
SNIP1Q8TAD8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SNIP1Q8TAD8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SNIP1Q8TAD8 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
SNIP1Q8TAD8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
SNIP1Q8TAD8 AC027612.3-201ENST00000413684 1047 ntBASIC21.58■■□□□ 1.05
SNIP1Q8TAD8 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.58■■□□□ 1.05
SNIP1Q8TAD8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SNIP1Q8TAD8 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
SNIP1Q8TAD8 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SNIP1Q8TAD8 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SNIP1Q8TAD8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms