Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.57■□□□□ 0.88
BBS1Q8NFJ9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.57■□□□□ 0.88
BBS1Q8NFJ9 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
BBS1Q8NFJ9 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BBS1Q8NFJ9 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BBS1Q8NFJ9 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
BBS1Q8NFJ9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BBS1Q8NFJ9 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.56■□□□□ 0.88
BBS1Q8NFJ9 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
BBS1Q8NFJ9 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BBS1Q8NFJ9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.56■□□□□ 0.88
BBS1Q8NFJ9 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BBS1Q8NFJ9 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
BBS1Q8NFJ9 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BBS1Q8NFJ9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.56■□□□□ 0.88
BBS1Q8NFJ9 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
BBS1Q8NFJ9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
BBS1Q8NFJ9 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
BBS1Q8NFJ9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.55■□□□□ 0.88
BBS1Q8NFJ9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
BBS1Q8NFJ9 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.55■□□□□ 0.88
BBS1Q8NFJ9 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
BBS1Q8NFJ9 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.55■□□□□ 0.88
BBS1Q8NFJ9 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BBS1Q8NFJ9 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BBS1Q8NFJ9 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BBS1Q8NFJ9 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
BBS1Q8NFJ9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BBS1Q8NFJ9 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
BBS1Q8NFJ9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BBS1Q8NFJ9 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BBS1Q8NFJ9 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BBS1Q8NFJ9 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.54■□□□□ 0.88
BBS1Q8NFJ9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
BBS1Q8NFJ9 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BBS1Q8NFJ9 AL117328.2-201ENST00000624617 1940 ntBASIC20.54■□□□□ 0.88
BBS1Q8NFJ9 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
BBS1Q8NFJ9 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.54■□□□□ 0.88
BBS1Q8NFJ9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.54■□□□□ 0.88
BBS1Q8NFJ9 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
BBS1Q8NFJ9 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
BBS1Q8NFJ9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
BBS1Q8NFJ9 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BBS1Q8NFJ9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BBS1Q8NFJ9 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
BBS1Q8NFJ9 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
BBS1Q8NFJ9 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
BBS1Q8NFJ9 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.53■□□□□ 0.88
BBS1Q8NFJ9 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
BBS1Q8NFJ9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.53■□□□□ 0.88
BBS1Q8NFJ9 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
BBS1Q8NFJ9 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.53■□□□□ 0.88
BBS1Q8NFJ9 AC233723.2-201ENST00000623798 2106 ntBASIC20.53■□□□□ 0.88
BBS1Q8NFJ9 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
BBS1Q8NFJ9 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BBS1Q8NFJ9 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.52■□□□□ 0.88
BBS1Q8NFJ9 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
BBS1Q8NFJ9 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
BBS1Q8NFJ9 AL592293.1-201ENST00000502889 1188 ntBASIC20.52■□□□□ 0.88
BBS1Q8NFJ9 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
BBS1Q8NFJ9 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BBS1Q8NFJ9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.52■□□□□ 0.87
BBS1Q8NFJ9 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
BBS1Q8NFJ9 DUSP8P3-201ENST00000399571 1760 ntBASIC20.51■□□□□ 0.87
BBS1Q8NFJ9 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
BBS1Q8NFJ9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BBS1Q8NFJ9 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BBS1Q8NFJ9 AC092068.2-201ENST00000590491 1708 ntBASIC20.51■□□□□ 0.87
BBS1Q8NFJ9 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
BBS1Q8NFJ9 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
BBS1Q8NFJ9 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
BBS1Q8NFJ9 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BBS1Q8NFJ9 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BBS1Q8NFJ9 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
BBS1Q8NFJ9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
BBS1Q8NFJ9 C1orf229-201ENST00000623686 2258 ntBASIC20.51■□□□□ 0.87
BBS1Q8NFJ9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BBS1Q8NFJ9 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.5■□□□□ 0.87
BBS1Q8NFJ9 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
BBS1Q8NFJ9 AC018755.3-202ENST00000596210 929 ntBASIC20.5■□□□□ 0.87
BBS1Q8NFJ9 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BBS1Q8NFJ9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
BBS1Q8NFJ9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BBS1Q8NFJ9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.5■□□□□ 0.87
BBS1Q8NFJ9 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BBS1Q8NFJ9 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
BBS1Q8NFJ9 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.49■□□□□ 0.87
BBS1Q8NFJ9 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
BBS1Q8NFJ9 EP400NL-214ENST00000641289 2402 ntBASIC20.49■□□□□ 0.87
BBS1Q8NFJ9 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
BBS1Q8NFJ9 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
BBS1Q8NFJ9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
BBS1Q8NFJ9 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BBS1Q8NFJ9 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.48■□□□□ 0.87
BBS1Q8NFJ9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
BBS1Q8NFJ9 AC087393.1-201ENST00000582896 145 ntBASIC20.48■□□□□ 0.87
BBS1Q8NFJ9 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
BBS1Q8NFJ9 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
BBS1Q8NFJ9 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.48■□□□□ 0.87
BBS1Q8NFJ9 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms