Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SYNE1Q8NF91 MIR5787-201ENST00000611784 55 ntBASIC6.98□□□□□ -1.29
SYNE1Q8NF91 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC6.98□□□□□ -1.29
SYNE1Q8NF91 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SYNE1Q8NF91 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SYNE1Q8NF91 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC6.98□□□□□ -1.29
SYNE1Q8NF91 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
SYNE1Q8NF91 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
SYNE1Q8NF91 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SYNE1Q8NF91 AK3-203ENST00000447596 705 ntTSL 2 BASIC6.98□□□□□ -1.29
SYNE1Q8NF91 AC087623.3-201ENST00000607047 1098 ntBASIC6.98□□□□□ -1.29
SYNE1Q8NF91 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SYNE1Q8NF91 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SYNE1Q8NF91 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 GLI3-203ENST00000437480 451 ntTSL 2 BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 C17orf82-201ENST00000623772 1530 ntBASIC6.97□□□□□ -1.29
SYNE1Q8NF91 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 RASA4CP-201ENST00000424092 1398 ntBASIC6.97□□□□□ -1.29
SYNE1Q8NF91 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 AF213884.3-201ENST00000563833 479 ntBASIC6.97□□□□□ -1.29
SYNE1Q8NF91 GRAMD4P4-201ENST00000613563 1115 ntBASIC6.97□□□□□ -1.29
SYNE1Q8NF91 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 AC104564.3-201ENST00000582367 638 ntBASIC6.97□□□□□ -1.29
SYNE1Q8NF91 ANKRD20A6P-201ENST00000618763 204 ntBASIC6.97□□□□□ -1.29
SYNE1Q8NF91 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 AC010501.1-201ENST00000606270 1962 ntBASIC6.97□□□□□ -1.29
SYNE1Q8NF91 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC6.97□□□□□ -1.29
SYNE1Q8NF91 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
SYNE1Q8NF91 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC6.96□□□□□ -1.29
SYNE1Q8NF91 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC6.96□□□□□ -1.29
SYNE1Q8NF91 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC6.96□□□□□ -1.29
SYNE1Q8NF91 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
SYNE1Q8NF91 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
SYNE1Q8NF91 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC6.96□□□□□ -1.29
SYNE1Q8NF91 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
SYNE1Q8NF91 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
SYNE1Q8NF91 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
SYNE1Q8NF91 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE1Q8NF91 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE1Q8NF91 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC6.96□□□□□ -1.3
SYNE1Q8NF91 AC004448.1-201ENST00000458332 883 ntBASIC6.96□□□□□ -1.3
SYNE1Q8NF91 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC6.96□□□□□ -1.3
SYNE1Q8NF91 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
SYNE1Q8NF91 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE1Q8NF91 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE1Q8NF91 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC6.96□□□□□ -1.3
SYNE1Q8NF91 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC6.96□□□□□ -1.3
SYNE1Q8NF91 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE1Q8NF91 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE1Q8NF91 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE1Q8NF91 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE1Q8NF91 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE1Q8NF91 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
SYNE1Q8NF91 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE1Q8NF91 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE1Q8NF91 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC6.96□□□□□ -1.3
SYNE1Q8NF91 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC6.96□□□□□ -1.3
SYNE1Q8NF91 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC6.96□□□□□ -1.3
SYNE1Q8NF91 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE1Q8NF91 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE1Q8NF91 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC6.96□□□□□ -1.3
SYNE1Q8NF91 AC097381.1-201ENST00000429019 1296 ntBASIC6.96□□□□□ -1.3
SYNE1Q8NF91 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC6.96□□□□□ -1.3
SYNE1Q8NF91 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE1Q8NF91 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 SLC6A10P-202ENST00000431994 2058 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms