Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DNAAF1Q8NEP3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DNAAF1Q8NEP3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
DNAAF1Q8NEP3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DNAAF1Q8NEP3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.03■□□□□ 0.8
DNAAF1Q8NEP3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
DNAAF1Q8NEP3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DNAAF1Q8NEP3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DNAAF1Q8NEP3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DNAAF1Q8NEP3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DNAAF1Q8NEP3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DNAAF1Q8NEP3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
DNAAF1Q8NEP3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
DNAAF1Q8NEP3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.02■□□□□ 0.8
DNAAF1Q8NEP3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DNAAF1Q8NEP3 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DNAAF1Q8NEP3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
DNAAF1Q8NEP3 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DNAAF1Q8NEP3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DNAAF1Q8NEP3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DNAAF1Q8NEP3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DNAAF1Q8NEP3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
DNAAF1Q8NEP3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
DNAAF1Q8NEP3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
DNAAF1Q8NEP3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
DNAAF1Q8NEP3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
DNAAF1Q8NEP3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
DNAAF1Q8NEP3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
DNAAF1Q8NEP3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DNAAF1Q8NEP3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
DNAAF1Q8NEP3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DNAAF1Q8NEP3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.01■□□□□ 0.79
DNAAF1Q8NEP3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
DNAAF1Q8NEP3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
DNAAF1Q8NEP3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
DNAAF1Q8NEP3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DNAAF1Q8NEP3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
DNAAF1Q8NEP3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
DNAAF1Q8NEP3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.01■□□□□ 0.79
DNAAF1Q8NEP3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
DNAAF1Q8NEP3 RPS2P7-201ENST00000447334 885 ntBASIC20■□□□□ 0.79
DNAAF1Q8NEP3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.79
DNAAF1Q8NEP3 AC018755.3-202ENST00000596210 929 ntBASIC20■□□□□ 0.79
DNAAF1Q8NEP3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
DNAAF1Q8NEP3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20■□□□□ 0.79
DNAAF1Q8NEP3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
DNAAF1Q8NEP3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
DNAAF1Q8NEP3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DNAAF1Q8NEP3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DNAAF1Q8NEP3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
DNAAF1Q8NEP3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DNAAF1Q8NEP3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
DNAAF1Q8NEP3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DNAAF1Q8NEP3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.99■□□□□ 0.79
DNAAF1Q8NEP3 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
DNAAF1Q8NEP3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DNAAF1Q8NEP3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DNAAF1Q8NEP3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DNAAF1Q8NEP3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.99■□□□□ 0.79
DNAAF1Q8NEP3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.98■□□□□ 0.79
DNAAF1Q8NEP3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
DNAAF1Q8NEP3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DNAAF1Q8NEP3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.98■□□□□ 0.79
DNAAF1Q8NEP3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
DNAAF1Q8NEP3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
DNAAF1Q8NEP3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DNAAF1Q8NEP3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DNAAF1Q8NEP3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.98■□□□□ 0.79
DNAAF1Q8NEP3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DNAAF1Q8NEP3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
DNAAF1Q8NEP3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.97■□□□□ 0.79
DNAAF1Q8NEP3 AL592293.1-201ENST00000502889 1188 ntBASIC19.97■□□□□ 0.79
DNAAF1Q8NEP3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DNAAF1Q8NEP3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DNAAF1Q8NEP3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.97■□□□□ 0.79
DNAAF1Q8NEP3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DNAAF1Q8NEP3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DNAAF1Q8NEP3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DNAAF1Q8NEP3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
DNAAF1Q8NEP3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.96■□□□□ 0.79
DNAAF1Q8NEP3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
DNAAF1Q8NEP3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DNAAF1Q8NEP3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
DNAAF1Q8NEP3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DNAAF1Q8NEP3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.95■□□□□ 0.79
DNAAF1Q8NEP3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DNAAF1Q8NEP3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DNAAF1Q8NEP3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
DNAAF1Q8NEP3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.95■□□□□ 0.78
DNAAF1Q8NEP3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DNAAF1Q8NEP3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.95■□□□□ 0.78
DNAAF1Q8NEP3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.95■□□□□ 0.78
DNAAF1Q8NEP3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
DNAAF1Q8NEP3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
DNAAF1Q8NEP3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.95■□□□□ 0.78
DNAAF1Q8NEP3 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.95■□□□□ 0.78
DNAAF1Q8NEP3 AL117328.2-201ENST00000624617 1940 ntBASIC19.95■□□□□ 0.78
DNAAF1Q8NEP3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DNAAF1Q8NEP3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DNAAF1Q8NEP3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms