Protein–RNA interactions for Protein: Q8NE00

TMEM104, Transmembrane protein 104, humanhuman

Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM104Q8NE00 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
TMEM104Q8NE00 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TMEM104Q8NE00 ANOS2P-203ENST00000472227 1816 ntBASIC19.58■□□□□ 0.72
TMEM104Q8NE00 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TMEM104Q8NE00 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.57■□□□□ 0.72
TMEM104Q8NE00 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
TMEM104Q8NE00 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM104Q8NE00 AL592293.1-201ENST00000502889 1188 ntBASIC19.57■□□□□ 0.72
TMEM104Q8NE00 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.57■□□□□ 0.72
TMEM104Q8NE00 AC018755.3-202ENST00000596210 929 ntBASIC19.57■□□□□ 0.72
TMEM104Q8NE00 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM104Q8NE00 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM104Q8NE00 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.57■□□□□ 0.72
TMEM104Q8NE00 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM104Q8NE00 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM104Q8NE00 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM104Q8NE00 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM104Q8NE00 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.56■□□□□ 0.72
TMEM104Q8NE00 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.56■□□□□ 0.72
TMEM104Q8NE00 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.56■□□□□ 0.72
TMEM104Q8NE00 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM104Q8NE00 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.56■□□□□ 0.72
TMEM104Q8NE00 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM104Q8NE00 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM104Q8NE00 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.56■□□□□ 0.72
TMEM104Q8NE00 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.56■□□□□ 0.72
TMEM104Q8NE00 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.55■□□□□ 0.72
TMEM104Q8NE00 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM104Q8NE00 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM104Q8NE00 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM104Q8NE00 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TMEM104Q8NE00 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TMEM104Q8NE00 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
TMEM104Q8NE00 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM104Q8NE00 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
TMEM104Q8NE00 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM104Q8NE00 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM104Q8NE00 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM104Q8NE00 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.54■□□□□ 0.72
TMEM104Q8NE00 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TMEM104Q8NE00 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM104Q8NE00 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.54■□□□□ 0.72
TMEM104Q8NE00 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TMEM104Q8NE00 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.54■□□□□ 0.72
TMEM104Q8NE00 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.54■□□□□ 0.72
TMEM104Q8NE00 AC087393.1-201ENST00000582896 145 ntBASIC19.54■□□□□ 0.72
TMEM104Q8NE00 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.54■□□□□ 0.72
TMEM104Q8NE00 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM104Q8NE00 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TMEM104Q8NE00 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TMEM104Q8NE00 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM104Q8NE00 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TMEM104Q8NE00 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM104Q8NE00 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TMEM104Q8NE00 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.53■□□□□ 0.72
TMEM104Q8NE00 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM104Q8NE00 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM104Q8NE00 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM104Q8NE00 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TMEM104Q8NE00 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM104Q8NE00 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
TMEM104Q8NE00 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM104Q8NE00 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM104Q8NE00 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM104Q8NE00 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM104Q8NE00 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
TMEM104Q8NE00 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.52■□□□□ 0.72
TMEM104Q8NE00 AL592295.1-201ENST00000400984 884 ntBASIC19.52■□□□□ 0.72
TMEM104Q8NE00 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.52■□□□□ 0.72
TMEM104Q8NE00 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
TMEM104Q8NE00 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM104Q8NE00 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TMEM104Q8NE00 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
TMEM104Q8NE00 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM104Q8NE00 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM104Q8NE00 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM104Q8NE00 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
TMEM104Q8NE00 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM104Q8NE00 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM104Q8NE00 RARRES2P2-201ENST00000394842 485 ntBASIC19.51■□□□□ 0.71
TMEM104Q8NE00 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.51■□□□□ 0.71
TMEM104Q8NE00 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.51■□□□□ 0.71
TMEM104Q8NE00 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.51■□□□□ 0.71
TMEM104Q8NE00 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.51■□□□□ 0.71
TMEM104Q8NE00 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM104Q8NE00 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM104Q8NE00 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TMEM104Q8NE00 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM104Q8NE00 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM104Q8NE00 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM104Q8NE00 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM104Q8NE00 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.51■□□□□ 0.71
TMEM104Q8NE00 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.51■□□□□ 0.71
TMEM104Q8NE00 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM104Q8NE00 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM104Q8NE00 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM104Q8NE00 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.5■□□□□ 0.71
TMEM104Q8NE00 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM104Q8NE00 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM104Q8NE00 AC092068.2-201ENST00000590491 1708 ntBASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms