Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC168Q8NDH2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC168Q8NDH2 AC080038.1-201ENST00000611274 1154 ntBASIC19.4■□□□□ 0.7
CCDC168Q8NDH2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC168Q8NDH2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCDC168Q8NDH2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC168Q8NDH2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC168Q8NDH2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.39■□□□□ 0.69
CCDC168Q8NDH2 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC168Q8NDH2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC168Q8NDH2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC168Q8NDH2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC168Q8NDH2 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC168Q8NDH2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.38■□□□□ 0.69
CCDC168Q8NDH2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC168Q8NDH2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC168Q8NDH2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC168Q8NDH2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC168Q8NDH2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC168Q8NDH2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC168Q8NDH2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC168Q8NDH2 TSPY20P-201ENST00000450910 630 ntBASIC19.37■□□□□ 0.69
CCDC168Q8NDH2 AC142472.1-201ENST00000612013 1741 ntBASIC19.37■□□□□ 0.69
CCDC168Q8NDH2 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
CCDC168Q8NDH2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC168Q8NDH2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CCDC168Q8NDH2 AC026185.1-201ENST00000445748 174 ntBASIC19.36■□□□□ 0.69
CCDC168Q8NDH2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC168Q8NDH2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC168Q8NDH2 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC168Q8NDH2 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC168Q8NDH2 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC168Q8NDH2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
CCDC168Q8NDH2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC168Q8NDH2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC168Q8NDH2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC168Q8NDH2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC168Q8NDH2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC168Q8NDH2 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
CCDC168Q8NDH2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC168Q8NDH2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC168Q8NDH2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC168Q8NDH2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
CCDC168Q8NDH2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC168Q8NDH2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC168Q8NDH2 AC012414.1-201ENST00000556676 535 ntBASIC19.35■□□□□ 0.69
CCDC168Q8NDH2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC168Q8NDH2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC168Q8NDH2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC168Q8NDH2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC168Q8NDH2 MIR572-201ENST00000384983 95 ntBASIC19.34■□□□□ 0.69
CCDC168Q8NDH2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC168Q8NDH2 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC168Q8NDH2 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC168Q8NDH2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC168Q8NDH2 AC016769.1-201ENST00000409132 1010 ntBASIC19.34■□□□□ 0.69
CCDC168Q8NDH2 AC006015.1-201ENST00000429970 570 ntBASIC19.34■□□□□ 0.69
CCDC168Q8NDH2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC168Q8NDH2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC168Q8NDH2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC168Q8NDH2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC168Q8NDH2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.33■□□□□ 0.69
CCDC168Q8NDH2 MIR6084-201ENST00000622012 110 ntBASIC19.33■□□□□ 0.69
CCDC168Q8NDH2 AP004609.3-201ENST00000610705 1884 ntBASIC19.33■□□□□ 0.69
CCDC168Q8NDH2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC168Q8NDH2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC168Q8NDH2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC168Q8NDH2 AC142086.2-201ENST00000569753 217 ntBASIC19.33■□□□□ 0.68
CCDC168Q8NDH2 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.33■□□□□ 0.68
CCDC168Q8NDH2 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC168Q8NDH2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC168Q8NDH2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC168Q8NDH2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC168Q8NDH2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CCDC168Q8NDH2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CCDC168Q8NDH2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC168Q8NDH2 CROCCP5-201ENST00000436658 830 ntBASIC19.32■□□□□ 0.68
CCDC168Q8NDH2 AC126544.1-201ENST00000580842 1059 ntBASIC19.32■□□□□ 0.68
CCDC168Q8NDH2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC168Q8NDH2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC168Q8NDH2 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC168Q8NDH2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC168Q8NDH2 AL355802.2-201ENST00000402069 882 ntBASIC19.31■□□□□ 0.68
CCDC168Q8NDH2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC168Q8NDH2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CCDC168Q8NDH2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC168Q8NDH2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC168Q8NDH2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CCDC168Q8NDH2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC168Q8NDH2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC168Q8NDH2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC168Q8NDH2 KRT18P61-201ENST00000585825 1298 ntBASIC19.31■□□□□ 0.68
CCDC168Q8NDH2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC168Q8NDH2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC168Q8NDH2 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCDC168Q8NDH2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC168Q8NDH2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC168Q8NDH2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CCDC168Q8NDH2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.3■□□□□ 0.68
CCDC168Q8NDH2 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms