Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 AF213884.3-201ENST00000563833 479 ntBASIC28.64■■■□□ 2.18
DDX60Q8IY21 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC28.64■■■□□ 2.18
DDX60Q8IY21 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC28.64■■■□□ 2.17
DDX60Q8IY21 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.17
DDX60Q8IY21 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC28.63■■■□□ 2.17
DDX60Q8IY21 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
DDX60Q8IY21 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
DDX60Q8IY21 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
DDX60Q8IY21 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
DDX60Q8IY21 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
DDX60Q8IY21 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
DDX60Q8IY21 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC28.62■■■□□ 2.17
DDX60Q8IY21 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
DDX60Q8IY21 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC28.62■■■□□ 2.17
DDX60Q8IY21 AC105265.2-201ENST00000467189 838 ntBASIC28.62■■■□□ 2.17
DDX60Q8IY21 GRAMD4P4-201ENST00000613563 1115 ntBASIC28.62■■■□□ 2.17
DDX60Q8IY21 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
DDX60Q8IY21 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC28.61■■■□□ 2.17
DDX60Q8IY21 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
DDX60Q8IY21 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
DDX60Q8IY21 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC28.61■■■□□ 2.17
DDX60Q8IY21 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
DDX60Q8IY21 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
DDX60Q8IY21 SERBP1P1-201ENST00000396021 1160 ntBASIC28.6■■■□□ 2.17
DDX60Q8IY21 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC28.6■■■□□ 2.17
DDX60Q8IY21 DUX4L19-201ENST00000557448 1267 ntBASIC28.6■■■□□ 2.17
DDX60Q8IY21 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
DDX60Q8IY21 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
DDX60Q8IY21 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
DDX60Q8IY21 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
DDX60Q8IY21 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC28.59■■■□□ 2.17
DDX60Q8IY21 AL022069.1-201ENST00000568025 1636 ntBASIC28.59■■■□□ 2.17
DDX60Q8IY21 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC28.59■■■□□ 2.17
DDX60Q8IY21 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC28.59■■■□□ 2.17
DDX60Q8IY21 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC28.59■■■□□ 2.17
DDX60Q8IY21 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
DDX60Q8IY21 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
DDX60Q8IY21 AC009102.2-201ENST00000606772 1639 ntBASIC28.58■■■□□ 2.17
DDX60Q8IY21 MIR4767-201ENST00000582827 78 ntBASIC28.58■■■□□ 2.17
DDX60Q8IY21 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC28.57■■■□□ 2.16
DDX60Q8IY21 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC28.57■■■□□ 2.16
DDX60Q8IY21 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
DDX60Q8IY21 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC28.57■■■□□ 2.16
DDX60Q8IY21 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
DDX60Q8IY21 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC28.57■■■□□ 2.16
DDX60Q8IY21 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
DDX60Q8IY21 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
DDX60Q8IY21 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
DDX60Q8IY21 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
DDX60Q8IY21 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
DDX60Q8IY21 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
DDX60Q8IY21 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
DDX60Q8IY21 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
DDX60Q8IY21 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
DDX60Q8IY21 AC006455.2-201ENST00000429931 906 ntBASIC28.56■■■□□ 2.16
DDX60Q8IY21 AC099791.2-201ENST00000605725 427 ntBASIC28.56■■■□□ 2.16
DDX60Q8IY21 NKILA-201ENST00000613231 537 ntTSL 4 BASIC28.56■■■□□ 2.16
DDX60Q8IY21 AC011298.3-201ENST00000615796 283 ntBASIC28.56■■■□□ 2.16
DDX60Q8IY21 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC28.56■■■□□ 2.16
DDX60Q8IY21 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC28.56■■■□□ 2.16
DDX60Q8IY21 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC28.56■■■□□ 2.16
DDX60Q8IY21 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
DDX60Q8IY21 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
DDX60Q8IY21 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC28.55■■■□□ 2.16
DDX60Q8IY21 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC28.55■■■□□ 2.16
DDX60Q8IY21 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
DDX60Q8IY21 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
DDX60Q8IY21 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
DDX60Q8IY21 AL136967.2-201ENST00000623968 743 ntBASIC28.55■■■□□ 2.16
DDX60Q8IY21 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC28.55■■■□□ 2.16
DDX60Q8IY21 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC28.54■■■□□ 2.16
DDX60Q8IY21 USF2-207ENST00000595068 1612 ntTSL 5 BASIC28.54■■■□□ 2.16
DDX60Q8IY21 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC28.54■■■□□ 2.16
DDX60Q8IY21 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC28.54■■■□□ 2.16
DDX60Q8IY21 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
DDX60Q8IY21 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
DDX60Q8IY21 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
DDX60Q8IY21 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
DDX60Q8IY21 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC28.53■■■□□ 2.16
DDX60Q8IY21 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
DDX60Q8IY21 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
DDX60Q8IY21 AL355001.2-201ENST00000620617 1191 ntBASIC28.53■■■□□ 2.16
DDX60Q8IY21 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
DDX60Q8IY21 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC28.52■■■□□ 2.16
DDX60Q8IY21 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
DDX60Q8IY21 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
DDX60Q8IY21 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
DDX60Q8IY21 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
DDX60Q8IY21 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC28.52■■■□□ 2.16
DDX60Q8IY21 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC28.52■■■□□ 2.16
DDX60Q8IY21 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC28.52■■■□□ 2.16
DDX60Q8IY21 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC28.51■■■□□ 2.16
DDX60Q8IY21 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
DDX60Q8IY21 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC28.51■■■□□ 2.15
DDX60Q8IY21 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
DDX60Q8IY21 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
DDX60Q8IY21 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC28.51■■■□□ 2.15
DDX60Q8IY21 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
DDX60Q8IY21 SYT6-210ENST00000641643 1587 ntBASIC28.51■■■□□ 2.15
DDX60Q8IY21 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms