Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LINC00346Q8IVM7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LINC00346Q8IVM7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LINC00346Q8IVM7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LINC00346Q8IVM7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.21■□□□□ 0.83
LINC00346Q8IVM7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.21■□□□□ 0.83
LINC00346Q8IVM7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.21■□□□□ 0.83
LINC00346Q8IVM7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.21■□□□□ 0.83
LINC00346Q8IVM7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LINC00346Q8IVM7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LINC00346Q8IVM7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LINC00346Q8IVM7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.21■□□□□ 0.83
LINC00346Q8IVM7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.2■□□□□ 0.82
LINC00346Q8IVM7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LINC00346Q8IVM7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.2■□□□□ 0.82
LINC00346Q8IVM7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.2■□□□□ 0.82
LINC00346Q8IVM7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.2■□□□□ 0.82
LINC00346Q8IVM7 AC074183.2-201ENST00000623112 922 ntBASIC20.2■□□□□ 0.82
LINC00346Q8IVM7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LINC00346Q8IVM7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
LINC00346Q8IVM7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINC00346Q8IVM7 DUSP8P5-201ENST00000422884 1815 ntBASIC20.2■□□□□ 0.82
LINC00346Q8IVM7 AL022069.1-201ENST00000568025 1636 ntBASIC20.2■□□□□ 0.82
LINC00346Q8IVM7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LINC00346Q8IVM7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
LINC00346Q8IVM7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.19■□□□□ 0.82
LINC00346Q8IVM7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LINC00346Q8IVM7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
LINC00346Q8IVM7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LINC00346Q8IVM7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LINC00346Q8IVM7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LINC00346Q8IVM7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.18■□□□□ 0.82
LINC00346Q8IVM7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINC00346Q8IVM7 AC133561.1-201ENST00000568600 2415 ntBASIC20.18■□□□□ 0.82
LINC00346Q8IVM7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINC00346Q8IVM7 AL161729.1-201ENST00000604104 1402 ntBASIC20.18■□□□□ 0.82
LINC00346Q8IVM7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINC00346Q8IVM7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00346Q8IVM7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00346Q8IVM7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
LINC00346Q8IVM7 AC131274.2-201ENST00000580697 1507 ntBASIC20.17■□□□□ 0.82
LINC00346Q8IVM7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00346Q8IVM7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LINC00346Q8IVM7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.17■□□□□ 0.82
LINC00346Q8IVM7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00346Q8IVM7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.17■□□□□ 0.82
LINC00346Q8IVM7 THA1P-201ENST00000590384 1145 ntBASIC20.17■□□□□ 0.82
LINC00346Q8IVM7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00346Q8IVM7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00346Q8IVM7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.17■□□□□ 0.82
LINC00346Q8IVM7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
LINC00346Q8IVM7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00346Q8IVM7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.17■□□□□ 0.82
LINC00346Q8IVM7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00346Q8IVM7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.16■□□□□ 0.82
LINC00346Q8IVM7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LINC00346Q8IVM7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LINC00346Q8IVM7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.16■□□□□ 0.82
LINC00346Q8IVM7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.16■□□□□ 0.82
LINC00346Q8IVM7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.16■□□□□ 0.82
LINC00346Q8IVM7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LINC00346Q8IVM7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
LINC00346Q8IVM7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LINC00346Q8IVM7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LINC00346Q8IVM7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LINC00346Q8IVM7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.15■□□□□ 0.82
LINC00346Q8IVM7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LINC00346Q8IVM7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.15■□□□□ 0.82
LINC00346Q8IVM7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.15■□□□□ 0.82
LINC00346Q8IVM7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.15■□□□□ 0.82
LINC00346Q8IVM7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LINC00346Q8IVM7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.15■□□□□ 0.82
LINC00346Q8IVM7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.15■□□□□ 0.82
LINC00346Q8IVM7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
LINC00346Q8IVM7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LINC00346Q8IVM7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.15■□□□□ 0.82
LINC00346Q8IVM7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LINC00346Q8IVM7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.14■□□□□ 0.81
LINC00346Q8IVM7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LINC00346Q8IVM7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LINC00346Q8IVM7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LINC00346Q8IVM7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LINC00346Q8IVM7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
LINC00346Q8IVM7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.14■□□□□ 0.81
LINC00346Q8IVM7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
LINC00346Q8IVM7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LINC00346Q8IVM7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LINC00346Q8IVM7 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.14■□□□□ 0.81
LINC00346Q8IVM7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
LINC00346Q8IVM7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LINC00346Q8IVM7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
LINC00346Q8IVM7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINC00346Q8IVM7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.13■□□□□ 0.81
LINC00346Q8IVM7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.13■□□□□ 0.81
LINC00346Q8IVM7 KRT8P33-201ENST00000508125 1423 ntBASIC20.13■□□□□ 0.81
LINC00346Q8IVM7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
LINC00346Q8IVM7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINC00346Q8IVM7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINC00346Q8IVM7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.13■□□□□ 0.81
LINC00346Q8IVM7 MIR4281-201ENST00000580852 62 ntBASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms