Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
HIST2H3AQ71DI3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HIST2H3AQ71DI3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
HIST2H3AQ71DI3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HIST2H3AQ71DI3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HIST2H3AQ71DI3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HIST2H3AQ71DI3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.07■□□□□ 0.8
HIST2H3AQ71DI3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HIST2H3AQ71DI3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HIST2H3AQ71DI3 AC103724.3-201ENST00000564481 992 ntBASIC20.07■□□□□ 0.8
HIST2H3AQ71DI3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.07■□□□□ 0.8
HIST2H3AQ71DI3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.07■□□□□ 0.8
HIST2H3AQ71DI3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.07■□□□□ 0.8
HIST2H3AQ71DI3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HIST2H3AQ71DI3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HIST2H3AQ71DI3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
HIST2H3AQ71DI3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HIST2H3AQ71DI3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HIST2H3AQ71DI3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
HIST2H3AQ71DI3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HIST2H3AQ71DI3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
HIST2H3AQ71DI3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HIST2H3AQ71DI3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
HIST2H3AQ71DI3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HIST2H3AQ71DI3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HIST2H3AQ71DI3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.05■□□□□ 0.8
HIST2H3AQ71DI3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.05■□□□□ 0.8
HIST2H3AQ71DI3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HIST2H3AQ71DI3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
HIST2H3AQ71DI3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.05■□□□□ 0.8
HIST2H3AQ71DI3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HIST2H3AQ71DI3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HIST2H3AQ71DI3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.05■□□□□ 0.8
HIST2H3AQ71DI3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HIST2H3AQ71DI3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HIST2H3AQ71DI3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
HIST2H3AQ71DI3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
HIST2H3AQ71DI3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HIST2H3AQ71DI3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
HIST2H3AQ71DI3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HIST2H3AQ71DI3 YBX1P4-201ENST00000392794 808 ntBASIC20.04■□□□□ 0.8
HIST2H3AQ71DI3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HIST2H3AQ71DI3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HIST2H3AQ71DI3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
HIST2H3AQ71DI3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HIST2H3AQ71DI3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
HIST2H3AQ71DI3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HIST2H3AQ71DI3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.03■□□□□ 0.8
HIST2H3AQ71DI3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HIST2H3AQ71DI3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HIST2H3AQ71DI3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
HIST2H3AQ71DI3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
HIST2H3AQ71DI3 KRT8P33-201ENST00000508125 1423 ntBASIC20.02■□□□□ 0.8
HIST2H3AQ71DI3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.02■□□□□ 0.8
HIST2H3AQ71DI3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HIST2H3AQ71DI3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HIST2H3AQ71DI3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.02■□□□□ 0.8
HIST2H3AQ71DI3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.02■□□□□ 0.8
HIST2H3AQ71DI3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HIST2H3AQ71DI3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.02■□□□□ 0.8
HIST2H3AQ71DI3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HIST2H3AQ71DI3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HIST2H3AQ71DI3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
HIST2H3AQ71DI3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HIST2H3AQ71DI3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.01■□□□□ 0.79
HIST2H3AQ71DI3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HIST2H3AQ71DI3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HIST2H3AQ71DI3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
HIST2H3AQ71DI3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HIST2H3AQ71DI3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.01■□□□□ 0.79
HIST2H3AQ71DI3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HIST2H3AQ71DI3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HIST2H3AQ71DI3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HIST2H3AQ71DI3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HIST2H3AQ71DI3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
HIST2H3AQ71DI3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HIST2H3AQ71DI3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20■□□□□ 0.79
HIST2H3AQ71DI3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20■□□□□ 0.79
HIST2H3AQ71DI3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
HIST2H3AQ71DI3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
HIST2H3AQ71DI3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20■□□□□ 0.79
HIST2H3AQ71DI3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
HIST2H3AQ71DI3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20■□□□□ 0.79
HIST2H3AQ71DI3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HIST2H3AQ71DI3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20■□□□□ 0.79
HIST2H3AQ71DI3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20■□□□□ 0.79
HIST2H3AQ71DI3 AC004448.1-201ENST00000458332 883 ntBASIC20■□□□□ 0.79
HIST2H3AQ71DI3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HIST2H3AQ71DI3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20■□□□□ 0.79
HIST2H3AQ71DI3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20■□□□□ 0.79
HIST2H3AQ71DI3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20■□□□□ 0.79
HIST2H3AQ71DI3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HIST2H3AQ71DI3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20■□□□□ 0.79
HIST2H3AQ71DI3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HIST2H3AQ71DI3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HIST2H3AQ71DI3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HIST2H3AQ71DI3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.99■□□□□ 0.79
HIST2H3AQ71DI3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
HIST2H3AQ71DI3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HIST2H3AQ71DI3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms