Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.76■□□□□ 0.75
COLCA1Q6ZS62 SNX5-217ENST00000606557 1087 ntBASIC19.76■□□□□ 0.75
COLCA1Q6ZS62 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COLCA1Q6ZS62 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.76■□□□□ 0.75
COLCA1Q6ZS62 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COLCA1Q6ZS62 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COLCA1Q6ZS62 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
COLCA1Q6ZS62 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COLCA1Q6ZS62 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COLCA1Q6ZS62 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
COLCA1Q6ZS62 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
COLCA1Q6ZS62 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COLCA1Q6ZS62 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.75■□□□□ 0.75
COLCA1Q6ZS62 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
COLCA1Q6ZS62 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COLCA1Q6ZS62 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
COLCA1Q6ZS62 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.75■□□□□ 0.75
COLCA1Q6ZS62 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COLCA1Q6ZS62 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COLCA1Q6ZS62 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.75■□□□□ 0.75
COLCA1Q6ZS62 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.75■□□□□ 0.75
COLCA1Q6ZS62 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
COLCA1Q6ZS62 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
COLCA1Q6ZS62 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COLCA1Q6ZS62 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COLCA1Q6ZS62 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.74■□□□□ 0.75
COLCA1Q6ZS62 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COLCA1Q6ZS62 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COLCA1Q6ZS62 BX664725.1-201ENST00000438252 379 ntBASIC19.74■□□□□ 0.75
COLCA1Q6ZS62 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COLCA1Q6ZS62 Z92544.1-202ENST00000571933 1220 ntBASIC19.74■□□□□ 0.75
COLCA1Q6ZS62 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
COLCA1Q6ZS62 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COLCA1Q6ZS62 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COLCA1Q6ZS62 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
COLCA1Q6ZS62 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
COLCA1Q6ZS62 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COLCA1Q6ZS62 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COLCA1Q6ZS62 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COLCA1Q6ZS62 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.73■□□□□ 0.75
COLCA1Q6ZS62 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
COLCA1Q6ZS62 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COLCA1Q6ZS62 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COLCA1Q6ZS62 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COLCA1Q6ZS62 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COLCA1Q6ZS62 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.73■□□□□ 0.75
COLCA1Q6ZS62 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
COLCA1Q6ZS62 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
COLCA1Q6ZS62 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COLCA1Q6ZS62 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COLCA1Q6ZS62 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
COLCA1Q6ZS62 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COLCA1Q6ZS62 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COLCA1Q6ZS62 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.72■□□□□ 0.75
COLCA1Q6ZS62 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
COLCA1Q6ZS62 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COLCA1Q6ZS62 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COLCA1Q6ZS62 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COLCA1Q6ZS62 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
COLCA1Q6ZS62 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.72■□□□□ 0.75
COLCA1Q6ZS62 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.72■□□□□ 0.75
COLCA1Q6ZS62 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COLCA1Q6ZS62 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.71■□□□□ 0.75
COLCA1Q6ZS62 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
COLCA1Q6ZS62 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COLCA1Q6ZS62 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COLCA1Q6ZS62 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
COLCA1Q6ZS62 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.71■□□□□ 0.75
COLCA1Q6ZS62 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.71■□□□□ 0.75
COLCA1Q6ZS62 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.71■□□□□ 0.75
COLCA1Q6ZS62 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.71■□□□□ 0.75
COLCA1Q6ZS62 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COLCA1Q6ZS62 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
COLCA1Q6ZS62 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COLCA1Q6ZS62 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COLCA1Q6ZS62 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COLCA1Q6ZS62 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.7■□□□□ 0.74
COLCA1Q6ZS62 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
COLCA1Q6ZS62 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.7■□□□□ 0.74
COLCA1Q6ZS62 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COLCA1Q6ZS62 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COLCA1Q6ZS62 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COLCA1Q6ZS62 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COLCA1Q6ZS62 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.69■□□□□ 0.74
COLCA1Q6ZS62 AC009299.2-201ENST00000482477 511 ntBASIC19.69■□□□□ 0.74
COLCA1Q6ZS62 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COLCA1Q6ZS62 AL451085.2-201ENST00000605085 799 ntBASIC19.69■□□□□ 0.74
COLCA1Q6ZS62 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.69■□□□□ 0.74
COLCA1Q6ZS62 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COLCA1Q6ZS62 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.69■□□□□ 0.74
COLCA1Q6ZS62 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COLCA1Q6ZS62 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
COLCA1Q6ZS62 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COLCA1Q6ZS62 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COLCA1Q6ZS62 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COLCA1Q6ZS62 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COLCA1Q6ZS62 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.68■□□□□ 0.74
COLCA1Q6ZS62 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COLCA1Q6ZS62 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COLCA1Q6ZS62 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms