Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC35.52■■■■□ 3.28
CD109Q6YHK3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
CD109Q6YHK3 AC009086.3-201ENST00000623486 1008 ntBASIC35.52■■■■□ 3.28
CD109Q6YHK3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
CD109Q6YHK3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC35.51■■■■□ 3.28
CD109Q6YHK3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC35.51■■■■□ 3.28
CD109Q6YHK3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC35.51■■■■□ 3.28
CD109Q6YHK3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
CD109Q6YHK3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC35.5■■■■□ 3.27
CD109Q6YHK3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC35.5■■■■□ 3.27
CD109Q6YHK3 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
CD109Q6YHK3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
CD109Q6YHK3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC35.49■■■■□ 3.27
CD109Q6YHK3 GXYLT1P2-201ENST00000433312 1230 ntBASIC35.49■■■■□ 3.27
CD109Q6YHK3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
CD109Q6YHK3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
CD109Q6YHK3 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
CD109Q6YHK3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC35.49■■■■□ 3.27
CD109Q6YHK3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
CD109Q6YHK3 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
CD109Q6YHK3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC35.49■■■■□ 3.27
CD109Q6YHK3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC35.48■■■■□ 3.27
CD109Q6YHK3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
CD109Q6YHK3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
CD109Q6YHK3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC35.48■■■■□ 3.27
CD109Q6YHK3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC35.48■■■■□ 3.27
CD109Q6YHK3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC35.48■■■■□ 3.27
CD109Q6YHK3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC35.48■■■■□ 3.27
CD109Q6YHK3 MIR6084-201ENST00000622012 110 ntBASIC35.48■■■■□ 3.27
CD109Q6YHK3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC35.47■■■■□ 3.27
CD109Q6YHK3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
CD109Q6YHK3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
CD109Q6YHK3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC35.47■■■■□ 3.27
CD109Q6YHK3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC35.47■■■■□ 3.27
CD109Q6YHK3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC35.47■■■■□ 3.27
CD109Q6YHK3 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC35.47■■■■□ 3.27
CD109Q6YHK3 AC097639.1-201ENST00000565519 1891 ntBASIC35.46■■■■□ 3.27
CD109Q6YHK3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC35.46■■■■□ 3.27
CD109Q6YHK3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC35.46■■■■□ 3.27
CD109Q6YHK3 AC012414.1-201ENST00000556676 535 ntBASIC35.46■■■■□ 3.27
CD109Q6YHK3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC35.46■■■■□ 3.27
CD109Q6YHK3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
CD109Q6YHK3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC35.45■■■■□ 3.27
CD109Q6YHK3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
CD109Q6YHK3 NTF6G-201ENST00000591094 616 ntBASIC35.45■■■■□ 3.27
CD109Q6YHK3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC35.45■■■■□ 3.27
CD109Q6YHK3 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
CD109Q6YHK3 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC35.44■■■■□ 3.26
CD109Q6YHK3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC35.44■■■■□ 3.26
CD109Q6YHK3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC35.44■■■■□ 3.26
CD109Q6YHK3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC35.44■■■■□ 3.26
CD109Q6YHK3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC35.44■■■■□ 3.26
CD109Q6YHK3 ESRRAP2-201ENST00000418437 1549 ntBASIC35.44■■■■□ 3.26
CD109Q6YHK3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
CD109Q6YHK3 ABHD17AP1-201ENST00000358206 933 ntBASIC35.43■■■■□ 3.26
CD109Q6YHK3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC35.43■■■■□ 3.26
CD109Q6YHK3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC35.43■■■■□ 3.26
CD109Q6YHK3 AC096887.2-201ENST00000623443 1957 ntBASIC35.43■■■■□ 3.26
CD109Q6YHK3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
CD109Q6YHK3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC35.43■■■■□ 3.26
CD109Q6YHK3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC35.42■■■■□ 3.26
CD109Q6YHK3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC35.42■■■■□ 3.26
CD109Q6YHK3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC35.42■■■■□ 3.26
CD109Q6YHK3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC35.42■■■■□ 3.26
CD109Q6YHK3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
CD109Q6YHK3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC35.41■■■■□ 3.26
CD109Q6YHK3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
CD109Q6YHK3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC35.41■■■■□ 3.26
CD109Q6YHK3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
CD109Q6YHK3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC35.4■■■■□ 3.26
CD109Q6YHK3 KRT18P14-201ENST00000534205 1250 ntBASIC35.4■■■■□ 3.26
CD109Q6YHK3 TERF1P2-201ENST00000583350 1212 ntBASIC35.4■■■■□ 3.26
CD109Q6YHK3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
CD109Q6YHK3 MIR572-201ENST00000384983 95 ntBASIC35.4■■■■□ 3.26
CD109Q6YHK3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC35.4■■■■□ 3.26
CD109Q6YHK3 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
CD109Q6YHK3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC35.39■■■■□ 3.26
CD109Q6YHK3 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC35.39■■■■□ 3.26
CD109Q6YHK3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC35.39■■■■□ 3.26
CD109Q6YHK3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC35.39■■■■□ 3.26
CD109Q6YHK3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
CD109Q6YHK3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC35.39■■■■□ 3.26
CD109Q6YHK3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
CD109Q6YHK3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC35.38■■■■□ 3.26
CD109Q6YHK3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC35.38■■■■□ 3.25
CD109Q6YHK3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC35.38■■■■□ 3.25
CD109Q6YHK3 IGHV3-19-201ENST00000521488 291 ntBASIC35.38■■■■□ 3.25
CD109Q6YHK3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC35.38■■■■□ 3.25
CD109Q6YHK3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC35.38■■■■□ 3.25
CD109Q6YHK3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC35.38■■■■□ 3.25
CD109Q6YHK3 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC35.38■■■■□ 3.25
CD109Q6YHK3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
CD109Q6YHK3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
CD109Q6YHK3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC35.37■■■■□ 3.25
CD109Q6YHK3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
CD109Q6YHK3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC35.37■■■■□ 3.25
CD109Q6YHK3 RAP2CP1-201ENST00000605103 478 ntBASIC35.37■■■■□ 3.25
CD109Q6YHK3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC35.37■■■■□ 3.25
CD109Q6YHK3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC35.36■■■■□ 3.25
CD109Q6YHK3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC35.36■■■■□ 3.25
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms