Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RTL6Q6ICC9 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RTL6Q6ICC9 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
RTL6Q6ICC9 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RTL6Q6ICC9 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.6■□□□□ 0.89
RTL6Q6ICC9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RTL6Q6ICC9 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTL6Q6ICC9 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.6■□□□□ 0.89
RTL6Q6ICC9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RTL6Q6ICC9 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RTL6Q6ICC9 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTL6Q6ICC9 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RTL6Q6ICC9 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTL6Q6ICC9 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.6■□□□□ 0.89
RTL6Q6ICC9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RTL6Q6ICC9 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTL6Q6ICC9 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.59■□□□□ 0.89
RTL6Q6ICC9 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RTL6Q6ICC9 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTL6Q6ICC9 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
RTL6Q6ICC9 AC131274.2-201ENST00000580697 1507 ntBASIC20.59■□□□□ 0.89
RTL6Q6ICC9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTL6Q6ICC9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.59■□□□□ 0.89
RTL6Q6ICC9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.59■□□□□ 0.89
RTL6Q6ICC9 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RTL6Q6ICC9 AC133561.4-201ENST00000566112 224 ntBASIC20.59■□□□□ 0.89
RTL6Q6ICC9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.59■□□□□ 0.89
RTL6Q6ICC9 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RTL6Q6ICC9 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTL6Q6ICC9 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTL6Q6ICC9 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RTL6Q6ICC9 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RTL6Q6ICC9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RTL6Q6ICC9 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTL6Q6ICC9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTL6Q6ICC9 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTL6Q6ICC9 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTL6Q6ICC9 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RTL6Q6ICC9 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RTL6Q6ICC9 MIR6089-201ENST00000616698 64 ntBASIC20.57■□□□□ 0.88
RTL6Q6ICC9 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RTL6Q6ICC9 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTL6Q6ICC9 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTL6Q6ICC9 AC106739.1-201ENST00000617035 715 ntBASIC20.56■□□□□ 0.88
RTL6Q6ICC9 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTL6Q6ICC9 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTL6Q6ICC9 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
RTL6Q6ICC9 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RTL6Q6ICC9 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.56■□□□□ 0.88
RTL6Q6ICC9 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RTL6Q6ICC9 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTL6Q6ICC9 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RTL6Q6ICC9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.55■□□□□ 0.88
RTL6Q6ICC9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RTL6Q6ICC9 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTL6Q6ICC9 UNC93B3-201ENST00000308076 687 ntBASIC20.55■□□□□ 0.88
RTL6Q6ICC9 PBX2P1-201ENST00000493219 1291 ntBASIC20.55■□□□□ 0.88
RTL6Q6ICC9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RTL6Q6ICC9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTL6Q6ICC9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.55■□□□□ 0.88
RTL6Q6ICC9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTL6Q6ICC9 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.54■□□□□ 0.88
RTL6Q6ICC9 AC005703.6-201ENST00000623265 1329 ntBASIC20.54■□□□□ 0.88
RTL6Q6ICC9 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.54■□□□□ 0.88
RTL6Q6ICC9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.54■□□□□ 0.88
RTL6Q6ICC9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTL6Q6ICC9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.54■□□□□ 0.88
RTL6Q6ICC9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RTL6Q6ICC9 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
RTL6Q6ICC9 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.54■□□□□ 0.88
RTL6Q6ICC9 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTL6Q6ICC9 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTL6Q6ICC9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.53■□□□□ 0.88
RTL6Q6ICC9 SRD5A1P1-201ENST00000442297 786 ntBASIC20.53■□□□□ 0.88
RTL6Q6ICC9 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RTL6Q6ICC9 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RTL6Q6ICC9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.53■□□□□ 0.88
RTL6Q6ICC9 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTL6Q6ICC9 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTL6Q6ICC9 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTL6Q6ICC9 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RTL6Q6ICC9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTL6Q6ICC9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.52■□□□□ 0.88
RTL6Q6ICC9 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.52■□□□□ 0.88
RTL6Q6ICC9 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.52■□□□□ 0.88
RTL6Q6ICC9 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTL6Q6ICC9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.52■□□□□ 0.88
RTL6Q6ICC9 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RTL6Q6ICC9 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
RTL6Q6ICC9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.52■□□□□ 0.87
RTL6Q6ICC9 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.87
RTL6Q6ICC9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RTL6Q6ICC9 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
RTL6Q6ICC9 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RTL6Q6ICC9 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTL6Q6ICC9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTL6Q6ICC9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.51■□□□□ 0.87
RTL6Q6ICC9 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTL6Q6ICC9 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.51■□□□□ 0.87
RTL6Q6ICC9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms