Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LRRC38Q5VT99 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
LRRC38Q5VT99 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
LRRC38Q5VT99 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
LRRC38Q5VT99 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.85■■□□□ 1.41
LRRC38Q5VT99 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.85■■□□□ 1.41
LRRC38Q5VT99 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LRRC38Q5VT99 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.84■■□□□ 1.41
LRRC38Q5VT99 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.84■■□□□ 1.41
LRRC38Q5VT99 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
LRRC38Q5VT99 AC010980.1-201ENST00000587192 1142 ntBASIC23.84■■□□□ 1.41
LRRC38Q5VT99 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.84■■□□□ 1.41
LRRC38Q5VT99 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.84■■□□□ 1.41
LRRC38Q5VT99 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
LRRC38Q5VT99 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LRRC38Q5VT99 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
LRRC38Q5VT99 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.84■■□□□ 1.41
LRRC38Q5VT99 AC068473.5-201ENST00000616428 2072 ntBASIC23.83■■□□□ 1.41
LRRC38Q5VT99 ALDH1A3-203ENST00000557963 1670 ntBASIC23.83■■□□□ 1.41
LRRC38Q5VT99 AF131216.4-201ENST00000638924 1588 ntBASIC23.83■■□□□ 1.41
LRRC38Q5VT99 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
LRRC38Q5VT99 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.83■■□□□ 1.41
LRRC38Q5VT99 THA1P-201ENST00000590384 1145 ntBASIC23.83■■□□□ 1.41
LRRC38Q5VT99 AC012354.3-201ENST00000623734 483 ntBASIC23.83■■□□□ 1.41
LRRC38Q5VT99 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.83■■□□□ 1.41
LRRC38Q5VT99 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.83■■□□□ 1.41
LRRC38Q5VT99 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
LRRC38Q5VT99 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
LRRC38Q5VT99 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LRRC38Q5VT99 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.82■■□□□ 1.4
LRRC38Q5VT99 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
LRRC38Q5VT99 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LRRC38Q5VT99 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LRRC38Q5VT99 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LRRC38Q5VT99 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LRRC38Q5VT99 MIR4281-201ENST00000580852 62 ntBASIC23.82■■□□□ 1.4
LRRC38Q5VT99 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.82■■□□□ 1.4
LRRC38Q5VT99 ANOS2P-203ENST00000472227 1816 ntBASIC23.82■■□□□ 1.4
LRRC38Q5VT99 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
LRRC38Q5VT99 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
LRRC38Q5VT99 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.81■■□□□ 1.4
LRRC38Q5VT99 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
LRRC38Q5VT99 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LRRC38Q5VT99 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
LRRC38Q5VT99 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
LRRC38Q5VT99 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
LRRC38Q5VT99 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
LRRC38Q5VT99 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.8■■□□□ 1.4
LRRC38Q5VT99 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
LRRC38Q5VT99 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LRRC38Q5VT99 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.8■■□□□ 1.4
LRRC38Q5VT99 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LRRC38Q5VT99 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.8■■□□□ 1.4
LRRC38Q5VT99 MIR4508-201ENST00000584178 70 ntBASIC23.8■■□□□ 1.4
LRRC38Q5VT99 AC092068.2-201ENST00000590491 1708 ntBASIC23.8■■□□□ 1.4
LRRC38Q5VT99 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.8■■□□□ 1.4
LRRC38Q5VT99 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
LRRC38Q5VT99 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
LRRC38Q5VT99 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LRRC38Q5VT99 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRRC38Q5VT99 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRRC38Q5VT99 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.79■■□□□ 1.4
LRRC38Q5VT99 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.79■■□□□ 1.4
LRRC38Q5VT99 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRRC38Q5VT99 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.79■■□□□ 1.4
LRRC38Q5VT99 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC38Q5VT99 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC38Q5VT99 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.78■■□□□ 1.4
LRRC38Q5VT99 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC38Q5VT99 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.78■■□□□ 1.4
LRRC38Q5VT99 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC38Q5VT99 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
LRRC38Q5VT99 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC38Q5VT99 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.78■■□□□ 1.4
LRRC38Q5VT99 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC38Q5VT99 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC38Q5VT99 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC38Q5VT99 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.77■■□□□ 1.4
LRRC38Q5VT99 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRRC38Q5VT99 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.77■■□□□ 1.4
LRRC38Q5VT99 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.77■■□□□ 1.4
LRRC38Q5VT99 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRRC38Q5VT99 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
LRRC38Q5VT99 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.77■■□□□ 1.4
LRRC38Q5VT99 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
LRRC38Q5VT99 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.77■■□□□ 1.4
LRRC38Q5VT99 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRRC38Q5VT99 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LRRC38Q5VT99 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LRRC38Q5VT99 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.76■■□□□ 1.39
LRRC38Q5VT99 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.76■■□□□ 1.39
LRRC38Q5VT99 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.76■■□□□ 1.39
LRRC38Q5VT99 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.75■■□□□ 1.39
LRRC38Q5VT99 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.75■■□□□ 1.39
LRRC38Q5VT99 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LRRC38Q5VT99 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
LRRC38Q5VT99 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
LRRC38Q5VT99 AC133561.1-201ENST00000568600 2415 ntBASIC23.74■■□□□ 1.39
LRRC38Q5VT99 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LRRC38Q5VT99 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms