Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRK2Q5S007 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRK2Q5S007 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.26■□□□□ 0.83
LRRK2Q5S007 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRK2Q5S007 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRK2Q5S007 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRK2Q5S007 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
LRRK2Q5S007 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRK2Q5S007 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.25■□□□□ 0.83
LRRK2Q5S007 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRK2Q5S007 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.25■□□□□ 0.83
LRRK2Q5S007 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.25■□□□□ 0.83
LRRK2Q5S007 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRK2Q5S007 NCF1B-203ENST00000435988 1254 ntBASIC20.25■□□□□ 0.83
LRRK2Q5S007 KRT18P61-201ENST00000585825 1298 ntBASIC20.25■□□□□ 0.83
LRRK2Q5S007 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
LRRK2Q5S007 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRK2Q5S007 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRK2Q5S007 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.24■□□□□ 0.83
LRRK2Q5S007 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.24■□□□□ 0.83
LRRK2Q5S007 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.24■□□□□ 0.83
LRRK2Q5S007 CD99P1-205ENST00000527459 561 ntBASIC20.24■□□□□ 0.83
LRRK2Q5S007 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.24■□□□□ 0.83
LRRK2Q5S007 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRK2Q5S007 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRK2Q5S007 AL355802.2-201ENST00000402069 882 ntBASIC20.23■□□□□ 0.83
LRRK2Q5S007 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.23■□□□□ 0.83
LRRK2Q5S007 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.23■□□□□ 0.83
LRRK2Q5S007 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRK2Q5S007 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
LRRK2Q5S007 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRK2Q5S007 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRK2Q5S007 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRK2Q5S007 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
LRRK2Q5S007 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.22■□□□□ 0.83
LRRK2Q5S007 DRD5P2-201ENST00000421395 2012 ntBASIC20.22■□□□□ 0.83
LRRK2Q5S007 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRK2Q5S007 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRRK2Q5S007 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.22■□□□□ 0.83
LRRK2Q5S007 AC012414.1-201ENST00000556676 535 ntBASIC20.22■□□□□ 0.83
LRRK2Q5S007 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRRK2Q5S007 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRK2Q5S007 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRRK2Q5S007 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRK2Q5S007 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRRK2Q5S007 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRRK2Q5S007 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.21■□□□□ 0.83
LRRK2Q5S007 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRK2Q5S007 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRK2Q5S007 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRK2Q5S007 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRK2Q5S007 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRK2Q5S007 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LRRK2Q5S007 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.21■□□□□ 0.83
LRRK2Q5S007 AC008687.6-201ENST00000596318 630 ntBASIC20.21■□□□□ 0.83
LRRK2Q5S007 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.21■□□□□ 0.83
LRRK2Q5S007 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRK2Q5S007 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
LRRK2Q5S007 AC016769.1-201ENST00000409132 1010 ntBASIC20.2■□□□□ 0.82
LRRK2Q5S007 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRRK2Q5S007 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
LRRK2Q5S007 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.2■□□□□ 0.82
LRRK2Q5S007 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRK2Q5S007 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRRK2Q5S007 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRK2Q5S007 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
LRRK2Q5S007 AL499627.2-201ENST00000606283 725 ntBASIC20.2■□□□□ 0.82
LRRK2Q5S007 MIR6084-201ENST00000622012 110 ntBASIC20.2■□□□□ 0.82
LRRK2Q5S007 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRRK2Q5S007 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.19■□□□□ 0.82
LRRK2Q5S007 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.19■□□□□ 0.82
LRRK2Q5S007 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LRRK2Q5S007 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
LRRK2Q5S007 MIR572-201ENST00000384983 95 ntBASIC20.19■□□□□ 0.82
LRRK2Q5S007 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.19■□□□□ 0.82
LRRK2Q5S007 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRK2Q5S007 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.18■□□□□ 0.82
LRRK2Q5S007 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
LRRK2Q5S007 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.18■□□□□ 0.82
LRRK2Q5S007 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRRK2Q5S007 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRRK2Q5S007 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
LRRK2Q5S007 AC073111.5-205ENST00000641717 521 ntBASIC20.18■□□□□ 0.82
LRRK2Q5S007 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
LRRK2Q5S007 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRK2Q5S007 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.18■□□□□ 0.82
LRRK2Q5S007 AC006970.2-201ENST00000450065 779 ntBASIC20.18■□□□□ 0.82
LRRK2Q5S007 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.18■□□□□ 0.82
LRRK2Q5S007 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRRK2Q5S007 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.18■□□□□ 0.82
LRRK2Q5S007 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.18■□□□□ 0.82
LRRK2Q5S007 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.18■□□□□ 0.82
LRRK2Q5S007 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRK2Q5S007 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LRRK2Q5S007 AC137761.2-201ENST00000561729 223 ntBASIC20.17■□□□□ 0.82
LRRK2Q5S007 AC145350.3-201ENST00000569033 163 ntBASIC20.17■□□□□ 0.82
LRRK2Q5S007 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
LRRK2Q5S007 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRRK2Q5S007 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRRK2Q5S007 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms