Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.9■□□□□ 0.94
RBM48Q5RL73 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RBM48Q5RL73 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.9■□□□□ 0.94
RBM48Q5RL73 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RBM48Q5RL73 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RBM48Q5RL73 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RBM48Q5RL73 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
RBM48Q5RL73 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.89■□□□□ 0.93
RBM48Q5RL73 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RBM48Q5RL73 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
RBM48Q5RL73 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.89■□□□□ 0.93
RBM48Q5RL73 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RBM48Q5RL73 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RBM48Q5RL73 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.88■□□□□ 0.93
RBM48Q5RL73 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RBM48Q5RL73 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
RBM48Q5RL73 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RBM48Q5RL73 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.88■□□□□ 0.93
RBM48Q5RL73 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RBM48Q5RL73 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.88■□□□□ 0.93
RBM48Q5RL73 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RBM48Q5RL73 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RBM48Q5RL73 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RBM48Q5RL73 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.88■□□□□ 0.93
RBM48Q5RL73 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RBM48Q5RL73 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RBM48Q5RL73 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RBM48Q5RL73 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
RBM48Q5RL73 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RBM48Q5RL73 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RBM48Q5RL73 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RBM48Q5RL73 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RBM48Q5RL73 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.87■□□□□ 0.93
RBM48Q5RL73 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RBM48Q5RL73 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.86■□□□□ 0.93
RBM48Q5RL73 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RBM48Q5RL73 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RBM48Q5RL73 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RBM48Q5RL73 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.86■□□□□ 0.93
RBM48Q5RL73 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.86■□□□□ 0.93
RBM48Q5RL73 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RBM48Q5RL73 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RBM48Q5RL73 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
RBM48Q5RL73 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RBM48Q5RL73 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RBM48Q5RL73 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RBM48Q5RL73 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.85■□□□□ 0.93
RBM48Q5RL73 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RBM48Q5RL73 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RBM48Q5RL73 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RBM48Q5RL73 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RBM48Q5RL73 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RBM48Q5RL73 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RBM48Q5RL73 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RBM48Q5RL73 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RBM48Q5RL73 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
RBM48Q5RL73 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.84■□□□□ 0.93
RBM48Q5RL73 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.84■□□□□ 0.93
RBM48Q5RL73 AL137060.1-201ENST00000618151 2648 ntBASIC20.84■□□□□ 0.93
RBM48Q5RL73 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.84■□□□□ 0.93
RBM48Q5RL73 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.84■□□□□ 0.93
RBM48Q5RL73 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RBM48Q5RL73 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RBM48Q5RL73 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RBM48Q5RL73 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RBM48Q5RL73 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RBM48Q5RL73 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
RBM48Q5RL73 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RBM48Q5RL73 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RBM48Q5RL73 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.83■□□□□ 0.93
RBM48Q5RL73 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RBM48Q5RL73 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RBM48Q5RL73 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.83■□□□□ 0.92
RBM48Q5RL73 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
RBM48Q5RL73 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RBM48Q5RL73 ESRRAP2-201ENST00000418437 1549 ntBASIC20.83■□□□□ 0.92
RBM48Q5RL73 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.83■□□□□ 0.92
RBM48Q5RL73 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.83■□□□□ 0.92
RBM48Q5RL73 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
RBM48Q5RL73 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.82■□□□□ 0.92
RBM48Q5RL73 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RBM48Q5RL73 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RBM48Q5RL73 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
RBM48Q5RL73 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RBM48Q5RL73 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RBM48Q5RL73 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RBM48Q5RL73 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RBM48Q5RL73 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RBM48Q5RL73 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RBM48Q5RL73 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RBM48Q5RL73 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RBM48Q5RL73 AC126177.7-201ENST00000547904 679 ntBASIC20.81■□□□□ 0.92
RBM48Q5RL73 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
RBM48Q5RL73 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RBM48Q5RL73 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RBM48Q5RL73 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RBM48Q5RL73 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RBM48Q5RL73 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RBM48Q5RL73 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RBM48Q5RL73 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms