Protein–RNA interactions for Protein: Q5R3I4

TTC38, Tetratricopeptide repeat protein 38, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38Q5R3I4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
TTC38Q5R3I4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
TTC38Q5R3I4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
TTC38Q5R3I4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
TTC38Q5R3I4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
TTC38Q5R3I4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
TTC38Q5R3I4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.07■■□□□ 1.76
TTC38Q5R3I4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC26.07■■□□□ 1.76
TTC38Q5R3I4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
TTC38Q5R3I4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC26.07■■□□□ 1.76
TTC38Q5R3I4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
TTC38Q5R3I4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
TTC38Q5R3I4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC26.07■■□□□ 1.76
TTC38Q5R3I4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
TTC38Q5R3I4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC26.06■■□□□ 1.76
TTC38Q5R3I4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.06■■□□□ 1.76
TTC38Q5R3I4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TTC38Q5R3I4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.06■■□□□ 1.76
TTC38Q5R3I4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.06■■□□□ 1.76
TTC38Q5R3I4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
TTC38Q5R3I4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
TTC38Q5R3I4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TTC38Q5R3I4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
TTC38Q5R3I4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.05■■□□□ 1.76
TTC38Q5R3I4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.05■■□□□ 1.76
TTC38Q5R3I4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TTC38Q5R3I4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
TTC38Q5R3I4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.05■■□□□ 1.76
TTC38Q5R3I4 AL451085.2-201ENST00000605085 799 ntBASIC26.05■■□□□ 1.76
TTC38Q5R3I4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
TTC38Q5R3I4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC26.05■■□□□ 1.76
TTC38Q5R3I4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TTC38Q5R3I4 ALDH1A3-203ENST00000557963 1670 ntBASIC26.05■■□□□ 1.76
TTC38Q5R3I4 AC021242.3-201ENST00000607598 1377 ntBASIC26.05■■□□□ 1.76
TTC38Q5R3I4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
TTC38Q5R3I4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
TTC38Q5R3I4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
TTC38Q5R3I4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC26.05■■□□□ 1.76
TTC38Q5R3I4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
TTC38Q5R3I4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.04■■□□□ 1.76
TTC38Q5R3I4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
TTC38Q5R3I4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
TTC38Q5R3I4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
TTC38Q5R3I4 BX664725.1-201ENST00000438252 379 ntBASIC26.04■■□□□ 1.76
TTC38Q5R3I4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.04■■□□□ 1.76
TTC38Q5R3I4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC26.04■■□□□ 1.76
TTC38Q5R3I4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TTC38Q5R3I4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TTC38Q5R3I4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TTC38Q5R3I4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
TTC38Q5R3I4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC26.03■■□□□ 1.76
TTC38Q5R3I4 SNX5-217ENST00000606557 1087 ntBASIC26.03■■□□□ 1.76
TTC38Q5R3I4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.03■■□□□ 1.76
TTC38Q5R3I4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
TTC38Q5R3I4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
TTC38Q5R3I4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
TTC38Q5R3I4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.02■■□□□ 1.76
TTC38Q5R3I4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
TTC38Q5R3I4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
TTC38Q5R3I4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.02■■□□□ 1.76
TTC38Q5R3I4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
TTC38Q5R3I4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
TTC38Q5R3I4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
TTC38Q5R3I4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
TTC38Q5R3I4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
TTC38Q5R3I4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC26.01■■□□□ 1.75
TTC38Q5R3I4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
TTC38Q5R3I4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.01■■□□□ 1.75
TTC38Q5R3I4 AC009299.2-201ENST00000482477 511 ntBASIC26.01■■□□□ 1.75
TTC38Q5R3I4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC26.01■■□□□ 1.75
TTC38Q5R3I4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.01■■□□□ 1.75
TTC38Q5R3I4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
TTC38Q5R3I4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TTC38Q5R3I4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TTC38Q5R3I4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC26■■□□□ 1.75
TTC38Q5R3I4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TTC38Q5R3I4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
TTC38Q5R3I4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
TTC38Q5R3I4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26■■□□□ 1.75
TTC38Q5R3I4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26■■□□□ 1.75
TTC38Q5R3I4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26■■□□□ 1.75
TTC38Q5R3I4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TTC38Q5R3I4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC25.99■■□□□ 1.75
TTC38Q5R3I4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC25.99■■□□□ 1.75
TTC38Q5R3I4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.99■■□□□ 1.75
TTC38Q5R3I4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
TTC38Q5R3I4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
TTC38Q5R3I4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
TTC38Q5R3I4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
TTC38Q5R3I4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC25.99■■□□□ 1.75
TTC38Q5R3I4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TTC38Q5R3I4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
TTC38Q5R3I4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
TTC38Q5R3I4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC25.98■■□□□ 1.75
TTC38Q5R3I4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
TTC38Q5R3I4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
TTC38Q5R3I4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TTC38Q5R3I4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
TTC38Q5R3I4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
TTC38Q5R3I4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms