Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.86■□□□□ 0.77
SNAI3Q3KNW1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.86■□□□□ 0.77
SNAI3Q3KNW1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SNAI3Q3KNW1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.86■□□□□ 0.77
SNAI3Q3KNW1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SNAI3Q3KNW1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SNAI3Q3KNW1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.86■□□□□ 0.77
SNAI3Q3KNW1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNAI3Q3KNW1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.86■□□□□ 0.77
SNAI3Q3KNW1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SNAI3Q3KNW1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SNAI3Q3KNW1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.85■□□□□ 0.77
SNAI3Q3KNW1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.85■□□□□ 0.77
SNAI3Q3KNW1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.85■□□□□ 0.77
SNAI3Q3KNW1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.85■□□□□ 0.77
SNAI3Q3KNW1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNAI3Q3KNW1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SNAI3Q3KNW1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNAI3Q3KNW1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNAI3Q3KNW1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.84■□□□□ 0.77
SNAI3Q3KNW1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNAI3Q3KNW1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SNAI3Q3KNW1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.84■□□□□ 0.77
SNAI3Q3KNW1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.84■□□□□ 0.77
SNAI3Q3KNW1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNAI3Q3KNW1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNAI3Q3KNW1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNAI3Q3KNW1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNAI3Q3KNW1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNAI3Q3KNW1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SNAI3Q3KNW1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNAI3Q3KNW1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SNAI3Q3KNW1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.83■□□□□ 0.77
SNAI3Q3KNW1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
SNAI3Q3KNW1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
SNAI3Q3KNW1 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNAI3Q3KNW1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNAI3Q3KNW1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNAI3Q3KNW1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.82■□□□□ 0.76
SNAI3Q3KNW1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SNAI3Q3KNW1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNAI3Q3KNW1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNAI3Q3KNW1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNAI3Q3KNW1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNAI3Q3KNW1 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.81■□□□□ 0.76
SNAI3Q3KNW1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SNAI3Q3KNW1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNAI3Q3KNW1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SNAI3Q3KNW1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.81■□□□□ 0.76
SNAI3Q3KNW1 AL031848.2-201ENST00000607670 837 ntBASIC19.81■□□□□ 0.76
SNAI3Q3KNW1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNAI3Q3KNW1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNAI3Q3KNW1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNAI3Q3KNW1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SNAI3Q3KNW1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNAI3Q3KNW1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNAI3Q3KNW1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNAI3Q3KNW1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.8■□□□□ 0.76
SNAI3Q3KNW1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNAI3Q3KNW1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.8■□□□□ 0.76
SNAI3Q3KNW1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.8■□□□□ 0.76
SNAI3Q3KNW1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SNAI3Q3KNW1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SNAI3Q3KNW1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SNAI3Q3KNW1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNAI3Q3KNW1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNAI3Q3KNW1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNAI3Q3KNW1 ALDH1A3-203ENST00000557963 1670 ntBASIC19.79■□□□□ 0.76
SNAI3Q3KNW1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SNAI3Q3KNW1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNAI3Q3KNW1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNAI3Q3KNW1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.79■□□□□ 0.76
SNAI3Q3KNW1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNAI3Q3KNW1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.79■□□□□ 0.76
SNAI3Q3KNW1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNAI3Q3KNW1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.79■□□□□ 0.76
SNAI3Q3KNW1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.79■□□□□ 0.76
SNAI3Q3KNW1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNAI3Q3KNW1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.78■□□□□ 0.76
SNAI3Q3KNW1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SNAI3Q3KNW1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SNAI3Q3KNW1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SNAI3Q3KNW1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.78■□□□□ 0.76
SNAI3Q3KNW1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.78■□□□□ 0.76
SNAI3Q3KNW1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNAI3Q3KNW1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNAI3Q3KNW1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SNAI3Q3KNW1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNAI3Q3KNW1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNAI3Q3KNW1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNAI3Q3KNW1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNAI3Q3KNW1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNAI3Q3KNW1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNAI3Q3KNW1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNAI3Q3KNW1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.77■□□□□ 0.76
SNAI3Q3KNW1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.77■□□□□ 0.76
SNAI3Q3KNW1 DUSP8P5-201ENST00000422884 1815 ntBASIC19.77■□□□□ 0.76
SNAI3Q3KNW1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNAI3Q3KNW1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.77■□□□□ 0.76
SNAI3Q3KNW1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms