Protein–RNA interactions for Protein: Q0VAM2

RASGEF1B, Ras-GEF domain-containing family member 1B, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1BQ0VAM2 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.68■□□□□ 0.9
RASGEF1BQ0VAM2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.68■□□□□ 0.9
RASGEF1BQ0VAM2 MIR4787-201ENST00000607364 84 ntBASIC20.68■□□□□ 0.9
RASGEF1BQ0VAM2 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RASGEF1BQ0VAM2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RASGEF1BQ0VAM2 AC021242.3-201ENST00000607598 1377 ntBASIC20.68■□□□□ 0.9
RASGEF1BQ0VAM2 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.68■□□□□ 0.9
RASGEF1BQ0VAM2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.67■□□□□ 0.9
RASGEF1BQ0VAM2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RASGEF1BQ0VAM2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RASGEF1BQ0VAM2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RASGEF1BQ0VAM2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.67■□□□□ 0.9
RASGEF1BQ0VAM2 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RASGEF1BQ0VAM2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RASGEF1BQ0VAM2 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RASGEF1BQ0VAM2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RASGEF1BQ0VAM2 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
RASGEF1BQ0VAM2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RASGEF1BQ0VAM2 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RASGEF1BQ0VAM2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.66■□□□□ 0.9
RASGEF1BQ0VAM2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.66■□□□□ 0.9
RASGEF1BQ0VAM2 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RASGEF1BQ0VAM2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RASGEF1BQ0VAM2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RASGEF1BQ0VAM2 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RASGEF1BQ0VAM2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RASGEF1BQ0VAM2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.65■□□□□ 0.9
RASGEF1BQ0VAM2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RASGEF1BQ0VAM2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RASGEF1BQ0VAM2 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.65■□□□□ 0.9
RASGEF1BQ0VAM2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.65■□□□□ 0.9
RASGEF1BQ0VAM2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RASGEF1BQ0VAM2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RASGEF1BQ0VAM2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RASGEF1BQ0VAM2 HLA-L-211ENST00000482052 1765 ntBASIC20.64■□□□□ 0.9
RASGEF1BQ0VAM2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.64■□□□□ 0.89
RASGEF1BQ0VAM2 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RASGEF1BQ0VAM2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RASGEF1BQ0VAM2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.64■□□□□ 0.89
RASGEF1BQ0VAM2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RASGEF1BQ0VAM2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.63■□□□□ 0.89
RASGEF1BQ0VAM2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RASGEF1BQ0VAM2 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RASGEF1BQ0VAM2 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RASGEF1BQ0VAM2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
RASGEF1BQ0VAM2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RASGEF1BQ0VAM2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RASGEF1BQ0VAM2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RASGEF1BQ0VAM2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RASGEF1BQ0VAM2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.63■□□□□ 0.89
RASGEF1BQ0VAM2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.63■□□□□ 0.89
RASGEF1BQ0VAM2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RASGEF1BQ0VAM2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.63■□□□□ 0.89
RASGEF1BQ0VAM2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RASGEF1BQ0VAM2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RASGEF1BQ0VAM2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RASGEF1BQ0VAM2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RASGEF1BQ0VAM2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RASGEF1BQ0VAM2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.62■□□□□ 0.89
RASGEF1BQ0VAM2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.62■□□□□ 0.89
RASGEF1BQ0VAM2 GUSBP5-201ENST00000418136 578 ntBASIC20.62■□□□□ 0.89
RASGEF1BQ0VAM2 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.62■□□□□ 0.89
RASGEF1BQ0VAM2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.62■□□□□ 0.89
RASGEF1BQ0VAM2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RASGEF1BQ0VAM2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RASGEF1BQ0VAM2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RASGEF1BQ0VAM2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RASGEF1BQ0VAM2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RASGEF1BQ0VAM2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RASGEF1BQ0VAM2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RASGEF1BQ0VAM2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RASGEF1BQ0VAM2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RASGEF1BQ0VAM2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RASGEF1BQ0VAM2 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RASGEF1BQ0VAM2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RASGEF1BQ0VAM2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.61■□□□□ 0.89
RASGEF1BQ0VAM2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RASGEF1BQ0VAM2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RASGEF1BQ0VAM2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.61■□□□□ 0.89
RASGEF1BQ0VAM2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RASGEF1BQ0VAM2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RASGEF1BQ0VAM2 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.61■□□□□ 0.89
RASGEF1BQ0VAM2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.61■□□□□ 0.89
RASGEF1BQ0VAM2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RASGEF1BQ0VAM2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.6■□□□□ 0.89
RASGEF1BQ0VAM2 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.6■□□□□ 0.89
RASGEF1BQ0VAM2 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RASGEF1BQ0VAM2 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RASGEF1BQ0VAM2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RASGEF1BQ0VAM2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.6■□□□□ 0.89
RASGEF1BQ0VAM2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RASGEF1BQ0VAM2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RASGEF1BQ0VAM2 AC092028.1-203ENST00000608262 953 ntBASIC20.6■□□□□ 0.89
RASGEF1BQ0VAM2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RASGEF1BQ0VAM2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RASGEF1BQ0VAM2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RASGEF1BQ0VAM2 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RASGEF1BQ0VAM2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.6■□□□□ 0.89
RASGEF1BQ0VAM2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RASGEF1BQ0VAM2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms