Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.03■■□□□ 1.12
HMGCS1Q01581 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.03■■□□□ 1.12
HMGCS1Q01581 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HMGCS1Q01581 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HMGCS1Q01581 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HMGCS1Q01581 AC022616.5-201ENST00000518796 181 ntBASIC22.03■■□□□ 1.12
HMGCS1Q01581 PVT1_1.1-201ENST00000615125 194 ntBASIC22.03■■□□□ 1.12
HMGCS1Q01581 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HMGCS1Q01581 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
HMGCS1Q01581 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HMGCS1Q01581 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
HMGCS1Q01581 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HMGCS1Q01581 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HMGCS1Q01581 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
HMGCS1Q01581 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
HMGCS1Q01581 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
HMGCS1Q01581 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.02■■□□□ 1.12
HMGCS1Q01581 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.02■■□□□ 1.12
HMGCS1Q01581 AL161729.1-201ENST00000604104 1402 ntBASIC22.02■■□□□ 1.12
HMGCS1Q01581 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
HMGCS1Q01581 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HMGCS1Q01581 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.02■■□□□ 1.12
HMGCS1Q01581 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.02■■□□□ 1.12
HMGCS1Q01581 AL022069.1-201ENST00000568025 1636 ntBASIC22.02■■□□□ 1.11
HMGCS1Q01581 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
HMGCS1Q01581 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
HMGCS1Q01581 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
HMGCS1Q01581 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.01■■□□□ 1.11
HMGCS1Q01581 TSPY13P-201ENST00000338964 914 ntBASIC22.01■■□□□ 1.11
HMGCS1Q01581 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.01■■□□□ 1.11
HMGCS1Q01581 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HMGCS1Q01581 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.01■■□□□ 1.11
HMGCS1Q01581 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HMGCS1Q01581 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22■■□□□ 1.11
HMGCS1Q01581 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
HMGCS1Q01581 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HMGCS1Q01581 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HMGCS1Q01581 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22■■□□□ 1.11
HMGCS1Q01581 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
HMGCS1Q01581 AC010980.1-201ENST00000587192 1142 ntBASIC22■■□□□ 1.11
HMGCS1Q01581 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HMGCS1Q01581 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
HMGCS1Q01581 AC131274.2-201ENST00000580697 1507 ntBASIC22■■□□□ 1.11
HMGCS1Q01581 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
HMGCS1Q01581 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HMGCS1Q01581 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.99■■□□□ 1.11
HMGCS1Q01581 AC120024.1-201ENST00000562672 995 ntBASIC21.99■■□□□ 1.11
HMGCS1Q01581 AL033527.3-201ENST00000566366 1196 ntBASIC21.99■■□□□ 1.11
HMGCS1Q01581 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HMGCS1Q01581 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
HMGCS1Q01581 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HMGCS1Q01581 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
HMGCS1Q01581 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.99■■□□□ 1.11
HMGCS1Q01581 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.99■■□□□ 1.11
HMGCS1Q01581 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.98■■□□□ 1.11
HMGCS1Q01581 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
HMGCS1Q01581 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HMGCS1Q01581 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.98■■□□□ 1.11
HMGCS1Q01581 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.98■■□□□ 1.11
HMGCS1Q01581 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.98■■□□□ 1.11
HMGCS1Q01581 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
HMGCS1Q01581 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.98■■□□□ 1.11
HMGCS1Q01581 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.98■■□□□ 1.11
HMGCS1Q01581 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
HMGCS1Q01581 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
HMGCS1Q01581 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HMGCS1Q01581 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.97■■□□□ 1.11
HMGCS1Q01581 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HMGCS1Q01581 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HMGCS1Q01581 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.97■■□□□ 1.11
HMGCS1Q01581 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HMGCS1Q01581 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
HMGCS1Q01581 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HMGCS1Q01581 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HMGCS1Q01581 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HMGCS1Q01581 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HMGCS1Q01581 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HMGCS1Q01581 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.96■■□□□ 1.11
HMGCS1Q01581 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.96■■□□□ 1.11
HMGCS1Q01581 AC074183.2-201ENST00000623112 922 ntBASIC21.96■■□□□ 1.11
HMGCS1Q01581 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HMGCS1Q01581 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
HMGCS1Q01581 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HMGCS1Q01581 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
HMGCS1Q01581 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
HMGCS1Q01581 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.96■■□□□ 1.11
HMGCS1Q01581 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HMGCS1Q01581 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.95■■□□□ 1.11
HMGCS1Q01581 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.95■■□□□ 1.1
HMGCS1Q01581 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.95■■□□□ 1.1
HMGCS1Q01581 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HMGCS1Q01581 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HMGCS1Q01581 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
HMGCS1Q01581 ANOS2P-203ENST00000472227 1816 ntBASIC21.94■■□□□ 1.1
HMGCS1Q01581 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HMGCS1Q01581 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HMGCS1Q01581 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.94■■□□□ 1.1
HMGCS1Q01581 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HMGCS1Q01581 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HMGCS1Q01581 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms