Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.1■□□□□ 0.81
LSM6P62312 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LSM6P62312 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.1■□□□□ 0.81
LSM6P62312 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LSM6P62312 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
LSM6P62312 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.1■□□□□ 0.81
LSM6P62312 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.1■□□□□ 0.81
LSM6P62312 ALDH1A3-203ENST00000557963 1670 ntBASIC20.1■□□□□ 0.81
LSM6P62312 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
LSM6P62312 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
LSM6P62312 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LSM6P62312 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LSM6P62312 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.09■□□□□ 0.81
LSM6P62312 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LSM6P62312 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.09■□□□□ 0.81
LSM6P62312 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LSM6P62312 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
LSM6P62312 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.09■□□□□ 0.81
LSM6P62312 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.09■□□□□ 0.81
LSM6P62312 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LSM6P62312 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LSM6P62312 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
LSM6P62312 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
LSM6P62312 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.08■□□□□ 0.81
LSM6P62312 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.08■□□□□ 0.81
LSM6P62312 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LSM6P62312 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LSM6P62312 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
LSM6P62312 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
LSM6P62312 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
LSM6P62312 AC004448.1-201ENST00000458332 883 ntBASIC20.08■□□□□ 0.81
LSM6P62312 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LSM6P62312 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.08■□□□□ 0.81
LSM6P62312 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
LSM6P62312 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LSM6P62312 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LSM6P62312 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LSM6P62312 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.08■□□□□ 0.8
LSM6P62312 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LSM6P62312 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
LSM6P62312 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LSM6P62312 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
LSM6P62312 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LSM6P62312 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LSM6P62312 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LSM6P62312 AL031848.2-201ENST00000607670 837 ntBASIC20.07■□□□□ 0.8
LSM6P62312 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.07■□□□□ 0.8
LSM6P62312 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
LSM6P62312 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LSM6P62312 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.07■□□□□ 0.8
LSM6P62312 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LSM6P62312 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LSM6P62312 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LSM6P62312 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LSM6P62312 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.06■□□□□ 0.8
LSM6P62312 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LSM6P62312 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LSM6P62312 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LSM6P62312 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LSM6P62312 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.06■□□□□ 0.8
LSM6P62312 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.06■□□□□ 0.8
LSM6P62312 AC137630.3-201ENST00000607245 391 ntBASIC20.06■□□□□ 0.8
LSM6P62312 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LSM6P62312 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
LSM6P62312 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LSM6P62312 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LSM6P62312 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LSM6P62312 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LSM6P62312 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.05■□□□□ 0.8
LSM6P62312 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSM6P62312 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.04■□□□□ 0.8
LSM6P62312 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSM6P62312 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
LSM6P62312 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LSM6P62312 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LSM6P62312 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSM6P62312 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
LSM6P62312 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSM6P62312 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSM6P62312 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
LSM6P62312 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
LSM6P62312 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LSM6P62312 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LSM6P62312 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LSM6P62312 DUSP8P5-201ENST00000422884 1815 ntBASIC20.02■□□□□ 0.8
LSM6P62312 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LSM6P62312 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.02■□□□□ 0.8
LSM6P62312 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.02■□□□□ 0.8
LSM6P62312 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.02■□□□□ 0.8
LSM6P62312 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
LSM6P62312 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LSM6P62312 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LSM6P62312 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LSM6P62312 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LSM6P62312 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LSM6P62312 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.01■□□□□ 0.79
LSM6P62312 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LSM6P62312 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LSM6P62312 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20■□□□□ 0.79
LSM6P62312 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms