Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEC61A1P61619 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEC61A1P61619 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEC61A1P61619 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEC61A1P61619 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.84■□□□□ 0.77
SEC61A1P61619 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SEC61A1P61619 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEC61A1P61619 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.84■□□□□ 0.77
SEC61A1P61619 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.84■□□□□ 0.77
SEC61A1P61619 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEC61A1P61619 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SEC61A1P61619 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.84■□□□□ 0.77
SEC61A1P61619 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.84■□□□□ 0.77
SEC61A1P61619 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEC61A1P61619 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.84■□□□□ 0.77
SEC61A1P61619 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEC61A1P61619 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEC61A1P61619 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEC61A1P61619 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEC61A1P61619 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SEC61A1P61619 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.83■□□□□ 0.77
SEC61A1P61619 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.83■□□□□ 0.77
SEC61A1P61619 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SEC61A1P61619 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SEC61A1P61619 AL117328.2-201ENST00000624617 1940 ntBASIC19.83■□□□□ 0.77
SEC61A1P61619 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.83■□□□□ 0.77
SEC61A1P61619 AL035685.1-201ENST00000636663 812 ntBASIC19.83■□□□□ 0.77
SEC61A1P61619 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SEC61A1P61619 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SEC61A1P61619 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
SEC61A1P61619 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SEC61A1P61619 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
SEC61A1P61619 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.83■□□□□ 0.76
SEC61A1P61619 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SEC61A1P61619 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SEC61A1P61619 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SEC61A1P61619 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SEC61A1P61619 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SEC61A1P61619 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SEC61A1P61619 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SEC61A1P61619 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SEC61A1P61619 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SEC61A1P61619 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SEC61A1P61619 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SEC61A1P61619 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SEC61A1P61619 SLC6A10P-202ENST00000431994 2058 ntBASIC19.82■□□□□ 0.76
SEC61A1P61619 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SEC61A1P61619 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEC61A1P61619 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.81■□□□□ 0.76
SEC61A1P61619 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.81■□□□□ 0.76
SEC61A1P61619 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEC61A1P61619 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SEC61A1P61619 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SEC61A1P61619 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SEC61A1P61619 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEC61A1P61619 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.81■□□□□ 0.76
SEC61A1P61619 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SEC61A1P61619 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SEC61A1P61619 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEC61A1P61619 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEC61A1P61619 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEC61A1P61619 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEC61A1P61619 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEC61A1P61619 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEC61A1P61619 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SEC61A1P61619 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SEC61A1P61619 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
SEC61A1P61619 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SEC61A1P61619 AC009299.2-201ENST00000482477 511 ntBASIC19.8■□□□□ 0.76
SEC61A1P61619 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.8■□□□□ 0.76
SEC61A1P61619 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEC61A1P61619 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEC61A1P61619 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEC61A1P61619 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SEC61A1P61619 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SEC61A1P61619 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEC61A1P61619 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SEC61A1P61619 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SEC61A1P61619 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEC61A1P61619 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEC61A1P61619 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.79■□□□□ 0.76
SEC61A1P61619 AL031848.2-201ENST00000607670 837 ntBASIC19.79■□□□□ 0.76
SEC61A1P61619 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEC61A1P61619 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SEC61A1P61619 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SEC61A1P61619 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SEC61A1P61619 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SEC61A1P61619 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SEC61A1P61619 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SEC61A1P61619 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.78■□□□□ 0.76
SEC61A1P61619 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SEC61A1P61619 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
SEC61A1P61619 C9orf163-202ENST00000624034 2573 ntBASIC19.78■□□□□ 0.76
SEC61A1P61619 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SEC61A1P61619 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SEC61A1P61619 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SEC61A1P61619 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SEC61A1P61619 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SEC61A1P61619 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SEC61A1P61619 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms