Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
WNT3P56703 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
WNT3P56703 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.71■■□□□ 1.07
WNT3P56703 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
WNT3P56703 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.7■■□□□ 1.07
WNT3P56703 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.7■■□□□ 1.06
WNT3P56703 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
WNT3P56703 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
WNT3P56703 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
WNT3P56703 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
WNT3P56703 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
WNT3P56703 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.7■■□□□ 1.06
WNT3P56703 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
WNT3P56703 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.69■■□□□ 1.06
WNT3P56703 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
WNT3P56703 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
WNT3P56703 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
WNT3P56703 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
WNT3P56703 AC019171.1-201ENST00000601251 1056 ntBASIC21.69■■□□□ 1.06
WNT3P56703 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.69■■□□□ 1.06
WNT3P56703 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
WNT3P56703 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
WNT3P56703 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
WNT3P56703 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
WNT3P56703 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.68■■□□□ 1.06
WNT3P56703 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
WNT3P56703 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
WNT3P56703 AL451085.2-201ENST00000605085 799 ntBASIC21.68■■□□□ 1.06
WNT3P56703 AC011551.1-201ENST00000614101 683 ntBASIC21.68■■□□□ 1.06
WNT3P56703 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
WNT3P56703 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
WNT3P56703 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
WNT3P56703 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
WNT3P56703 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
WNT3P56703 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.67■■□□□ 1.06
WNT3P56703 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
WNT3P56703 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
WNT3P56703 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
WNT3P56703 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.66■■□□□ 1.06
WNT3P56703 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
WNT3P56703 ANOS2P-203ENST00000472227 1816 ntBASIC21.66■■□□□ 1.06
WNT3P56703 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.66■■□□□ 1.06
WNT3P56703 AC131274.2-201ENST00000580697 1507 ntBASIC21.66■■□□□ 1.06
WNT3P56703 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
WNT3P56703 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.66■■□□□ 1.06
WNT3P56703 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.66■■□□□ 1.06
WNT3P56703 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
WNT3P56703 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
WNT3P56703 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.66■■□□□ 1.06
WNT3P56703 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
WNT3P56703 AC103834.1-201ENST00000520383 144 ntBASIC21.65■■□□□ 1.06
WNT3P56703 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
WNT3P56703 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.65■■□□□ 1.06
WNT3P56703 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
WNT3P56703 AL022069.1-201ENST00000568025 1636 ntBASIC21.65■■□□□ 1.06
WNT3P56703 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
WNT3P56703 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
WNT3P56703 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
WNT3P56703 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
WNT3P56703 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.65■■□□□ 1.06
WNT3P56703 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
WNT3P56703 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.64■■□□□ 1.06
WNT3P56703 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
WNT3P56703 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
WNT3P56703 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
WNT3P56703 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
WNT3P56703 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.64■■□□□ 1.05
WNT3P56703 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.64■■□□□ 1.05
WNT3P56703 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
WNT3P56703 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.64■■□□□ 1.05
WNT3P56703 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.64■■□□□ 1.05
WNT3P56703 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.64■■□□□ 1.05
WNT3P56703 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
WNT3P56703 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
WNT3P56703 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
WNT3P56703 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.63■■□□□ 1.05
WNT3P56703 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.63■■□□□ 1.05
WNT3P56703 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
WNT3P56703 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
WNT3P56703 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
WNT3P56703 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.63■■□□□ 1.05
WNT3P56703 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
WNT3P56703 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.63■■□□□ 1.05
WNT3P56703 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
WNT3P56703 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
WNT3P56703 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
WNT3P56703 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
WNT3P56703 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
WNT3P56703 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.62■■□□□ 1.05
WNT3P56703 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
WNT3P56703 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
WNT3P56703 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
WNT3P56703 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.62■■□□□ 1.05
WNT3P56703 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.62■■□□□ 1.05
WNT3P56703 AC022616.5-201ENST00000518796 181 ntBASIC21.62■■□□□ 1.05
WNT3P56703 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.62■■□□□ 1.05
WNT3P56703 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.62■■□□□ 1.05
WNT3P56703 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.62■■□□□ 1.05
WNT3P56703 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
WNT3P56703 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms