Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.59■■□□□ 1.21
CLNS1AP54105 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CLNS1AP54105 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
CLNS1AP54105 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CLNS1AP54105 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CLNS1AP54105 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CLNS1AP54105 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.58■■□□□ 1.21
CLNS1AP54105 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.58■■□□□ 1.21
CLNS1AP54105 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CLNS1AP54105 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CLNS1AP54105 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CLNS1AP54105 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.58■■□□□ 1.2
CLNS1AP54105 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CLNS1AP54105 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.58■■□□□ 1.2
CLNS1AP54105 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLNS1AP54105 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLNS1AP54105 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLNS1AP54105 AC233723.2-201ENST00000623798 2106 ntBASIC22.57■■□□□ 1.2
CLNS1AP54105 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLNS1AP54105 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CLNS1AP54105 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLNS1AP54105 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
CLNS1AP54105 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLNS1AP54105 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLNS1AP54105 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLNS1AP54105 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CLNS1AP54105 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLNS1AP54105 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLNS1AP54105 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CLNS1AP54105 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLNS1AP54105 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.56■■□□□ 1.2
CLNS1AP54105 AC137767.1-201ENST00000602918 1920 ntBASIC22.56■■□□□ 1.2
CLNS1AP54105 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.56■■□□□ 1.2
CLNS1AP54105 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLNS1AP54105 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLNS1AP54105 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.56■■□□□ 1.2
CLNS1AP54105 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLNS1AP54105 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CLNS1AP54105 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CLNS1AP54105 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
CLNS1AP54105 MIR7108-201ENST00000614319 87 ntBASIC22.55■■□□□ 1.2
CLNS1AP54105 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLNS1AP54105 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.55■■□□□ 1.2
CLNS1AP54105 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
CLNS1AP54105 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLNS1AP54105 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CLNS1AP54105 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLNS1AP54105 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CLNS1AP54105 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CLNS1AP54105 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CLNS1AP54105 ECEL1P2-201ENST00000461596 1295 ntBASIC22.54■■□□□ 1.2
CLNS1AP54105 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CLNS1AP54105 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLNS1AP54105 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CLNS1AP54105 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLNS1AP54105 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
CLNS1AP54105 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLNS1AP54105 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.53■■□□□ 1.2
CLNS1AP54105 MIR639-201ENST00000384974 98 ntBASIC22.53■■□□□ 1.2
CLNS1AP54105 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLNS1AP54105 AC141586.4-201ENST00000624558 1573 ntBASIC22.53■■□□□ 1.2
CLNS1AP54105 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.53■■□□□ 1.2
CLNS1AP54105 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CLNS1AP54105 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLNS1AP54105 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.52■■□□□ 1.2
CLNS1AP54105 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.52■■□□□ 1.2
CLNS1AP54105 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLNS1AP54105 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLNS1AP54105 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.52■■□□□ 1.2
CLNS1AP54105 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLNS1AP54105 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CLNS1AP54105 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.52■■□□□ 1.2
CLNS1AP54105 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.52■■□□□ 1.2
CLNS1AP54105 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLNS1AP54105 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.52■■□□□ 1.2
CLNS1AP54105 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLNS1AP54105 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLNS1AP54105 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLNS1AP54105 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
CLNS1AP54105 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
CLNS1AP54105 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CLNS1AP54105 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLNS1AP54105 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CLNS1AP54105 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CLNS1AP54105 RP9P-202ENST00000450133 1212 ntBASIC22.51■■□□□ 1.19
CLNS1AP54105 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.51■■□□□ 1.19
CLNS1AP54105 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.51■■□□□ 1.19
CLNS1AP54105 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLNS1AP54105 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLNS1AP54105 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CLNS1AP54105 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.51■■□□□ 1.19
CLNS1AP54105 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.5■■□□□ 1.19
CLNS1AP54105 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLNS1AP54105 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC22.5■■□□□ 1.19
CLNS1AP54105 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLNS1AP54105 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.5■■□□□ 1.19
CLNS1AP54105 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLNS1AP54105 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.5■■□□□ 1.19
CLNS1AP54105 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.5■■□□□ 1.19
CLNS1AP54105 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms