Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 HIR2YOR038C 2628 nt5.48□□□□□ -1.53
RPT4P53549 APC4YDR118W 1959 nt5.48□□□□□ -1.53
RPT4P53549 RAD30YDR419W 1899 nt5.48□□□□□ -1.53
RPT4P53549 SLT2YHR030C 1455 nt5.48□□□□□ -1.53
RPT4P53549 YBL006W-AYBL006W-A 150 nt5.48□□□□□ -1.53
RPT4P53549 RPL15BYMR121C 615 nt5.48□□□□□ -1.53
RPT4P53549 TRS33YOR115C 807 nt5.48□□□□□ -1.53
RPT4P53549 EIS1YMR031C 2532 nt5.48□□□□□ -1.53
RPT4P53549 YOR1YGR281W 4434 nt5.48□□□□□ -1.53
RPT4P53549 HXT14YNL318C 1623 nt5.48□□□□□ -1.53
RPT4P53549 AAP1YHR047C 2571 nt5.48□□□□□ -1.53
RPT4P53549 STB3YDR169C 1542 nt5.48□□□□□ -1.53
RPT4P53549 RBA50YDR527W 1320 nt5.48□□□□□ -1.53
RPT4P53549 SSY5YJL156C 2100 nt5.47□□□□□ -1.53
RPT4P53549 YDL012CYDL012C 324 nt5.47□□□□□ -1.53
RPT4P53549 YDR417CYDR417C 372 nt5.47□□□□□ -1.53
RPT4P53549 YKL223WYKL223W 333 nt5.47□□□□□ -1.53
RPT4P53549 RFA2YNL312W 822 nt5.47□□□□□ -1.53
RPT4P53549 NPT1YOR209C 1290 nt5.47□□□□□ -1.53
RPT4P53549 SSH4YKL124W 1740 nt5.46□□□□□ -1.54
RPT4P53549 SRG1SRG1 551 nt5.46□□□□□ -1.54
RPT4P53549 RML2YEL050C 1182 nt5.46□□□□□ -1.54
RPT4P53549 YGR153WYGR153W 654 nt5.46□□□□□ -1.54
RPT4P53549 YGP1YNL160W 1065 nt5.46□□□□□ -1.54
RPT4P53549 SOL1YNR034W 966 nt5.46□□□□□ -1.54
RPT4P53549 ICY2YPL250C 411 nt5.46□□□□□ -1.54
RPT4P53549 YPL278CYPL278C 303 nt5.46□□□□□ -1.54
RPT4P53549 ROT2YBR229C 2865 nt5.46□□□□□ -1.54
RPT4P53549 VBA1YMR088C 1689 nt5.46□□□□□ -1.54
RPT4P53549 YDR396WYDR396W 501 nt5.45□□□□□ -1.54
RPT4P53549 NMD4YLR363C 657 nt5.45□□□□□ -1.54
RPT4P53549 CTR3YLR411W 726 nt5.45□□□□□ -1.54
RPT4P53549 YPR071WYPR071W 636 nt5.45□□□□□ -1.54
RPT4P53549 BUD22YMR014W 1560 nt5.45□□□□□ -1.54
RPT4P53549 URA7YBL039C 1740 nt5.45□□□□□ -1.54
RPT4P53549 DUR1,2YBR208C 5508 nt5.44□□□□□ -1.54
RPT4P53549 RAD57YDR004W 1383 nt5.44□□□□□ -1.54
RPT4P53549 UBI4YLL039C 1146 nt5.44□□□□□ -1.54
RPT4P53549 SCP1YOR367W 603 nt5.44□□□□□ -1.54
RPT4P53549 DPH6YLR143W 2058 nt5.44□□□□□ -1.54
RPT4P53549 BSC5YNR069C 1470 nt5.44□□□□□ -1.54
RPT4P53549 SYP1YCR030C 2613 nt5.44□□□□□ -1.54
RPT4P53549 CLB4YLR210W 1383 nt5.43□□□□□ -1.54
RPT4P53549 FOB1YDR110W 1701 nt5.43□□□□□ -1.54
RPT4P53549 HXT5YHR096C 1779 nt5.43□□□□□ -1.54
RPT4P53549 RFC2YJR068W 1062 nt5.43□□□□□ -1.54
RPT4P53549 YLR157W-DYLR157W-D 213 nt5.43□□□□□ -1.54
RPT4P53549 MED4YOR174W 855 nt5.43□□□□□ -1.54
RPT4P53549 MET7YOR241W 1647 nt5.43□□□□□ -1.54
RPT4P53549 BIT2YBR270C 1638 nt5.43□□□□□ -1.54
RPT4P53549 GLT1YDL171C 6438 nt5.43□□□□□ -1.54
RPT4P53549 RSC6YCR052W 1452 nt5.43□□□□□ -1.54
RPT4P53549 TUB3YML124C 1338 nt5.43□□□□□ -1.54
RPT4P53549 NSI1YDR026C 1713 nt5.43□□□□□ -1.54
RPT4P53549 YMR196WYMR196W 3267 nt5.42□□□□□ -1.54
RPT4P53549 YNG1YOR064C 660 nt5.42□□□□□ -1.54
RPT4P53549 SPN1YPR133C 1233 nt5.42□□□□□ -1.54
RPT4P53549 TAH18YPR048W 1872 nt5.42□□□□□ -1.54
RPT4P53549 YLH47YPR125W 1365 nt5.42□□□□□ -1.54
RPT4P53549 LYP1YNL268W 1836 nt5.41□□□□□ -1.54
RPT4P53549 SDA1YGR245C 2304 nt5.41□□□□□ -1.54
RPT4P53549 ABZ1YNR033W 2364 nt5.41□□□□□ -1.54
RPT4P53549 SIA1YOR137C 1869 nt5.41□□□□□ -1.54
RPT4P53549 GCN20YFR009W 2259 nt5.4□□□□□ -1.54
RPT4P53549 CBF5YLR175W 1452 nt5.4□□□□□ -1.54
RPT4P53549 HMLALPHA1YCL066W 528 nt5.4□□□□□ -1.54
RPT4P53549 MATALPHA1YCR040W 528 nt5.4□□□□□ -1.54
RPT4P53549 RPL43BYJR094W-A 279 nt5.4□□□□□ -1.54
RPT4P53549 OCA1YNL099C 717 nt5.4□□□□□ -1.54
RPT4P53549 snR19snR19 568 nt5.4□□□□□ -1.54
RPT4P53549 FRT2YAL028W 1587 nt5.4□□□□□ -1.55
RPT4P53549 PRO2YOR323C 1371 nt5.4□□□□□ -1.55
RPT4P53549 SUP35YDR172W 2058 nt5.39□□□□□ -1.55
RPT4P53549 HSP104YLL026W 2727 nt5.39□□□□□ -1.55
RPT4P53549 CCZ1YBR131W 2115 nt5.39□□□□□ -1.55
RPT4P53549 NUP1YOR098C 3231 nt5.39□□□□□ -1.55
RPT4P53549 NOP2YNL061W 1857 nt5.39□□□□□ -1.55
RPT4P53549 YGR066CYGR066C 879 nt5.39□□□□□ -1.55
RPT4P53549 OXP1YKL215C 3861 nt5.39□□□□□ -1.55
RPT4P53549 MCM6YGL201C 3054 nt5.39□□□□□ -1.55
RPT4P53549 KAR2YJL034W 2049 nt5.38□□□□□ -1.55
RPT4P53549 SIR2YDL042C 1689 nt5.38□□□□□ -1.55
RPT4P53549 CST6YIL036W 1764 nt5.38□□□□□ -1.55
RPT4P53549 YFR052C-AYFR052C-A 306 nt5.38□□□□□ -1.55
RPT4P53549 YHR095WYHR095W 495 nt5.38□□□□□ -1.55
RPT4P53549 RFU1YLR073C 603 nt5.38□□□□□ -1.55
RPT4P53549 QCR2YPR191W 1107 nt5.38□□□□□ -1.55
RPT4P53549 ATR1YML116W 1629 nt5.37□□□□□ -1.55
RPT4P53549 ALG6YOR002W 1635 nt5.37□□□□□ -1.55
RPT4P53549 GAD1YMR250W 1758 nt5.37□□□□□ -1.55
RPT4P53549 tL(UAG)JtL(UAG)J 82 nt5.37□□□□□ -1.55
RPT4P53549 tL(UAG)L1tL(UAG)L1 82 nt5.37□□□□□ -1.55
RPT4P53549 tL(UAG)L2tL(UAG)L2 82 nt5.37□□□□□ -1.55
RPT4P53549 RRN9YMR270C 1098 nt5.37□□□□□ -1.55
RPT4P53549 YNL181WYNL181W 1224 nt5.37□□□□□ -1.55
RPT4P53549 CPA1YOR303W 1236 nt5.37□□□□□ -1.55
RPT4P53549 SUE1YPR151C 621 nt5.37□□□□□ -1.55
RPT4P53549 RPT2YDL007W 1314 nt5.37□□□□□ -1.55
RPT4P53549 RPN5YDL147W 1338 nt5.37□□□□□ -1.55
RPT4P53549 CPS1YJL172W 1731 nt5.37□□□□□ -1.55
Retrieved 100 of 7,029 protein–RNA pairs in 41.7 ms