Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDX1P52945 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
PDX1P52945 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDX1P52945 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.21■■□□□ 1.15
PDX1P52945 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.21■■□□□ 1.15
PDX1P52945 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDX1P52945 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDX1P52945 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDX1P52945 EDA-201ENST00000338901 1233 ntBASIC22.2■■□□□ 1.14
PDX1P52945 AC026271.2-201ENST00000428091 497 ntBASIC22.2■■□□□ 1.14
PDX1P52945 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDX1P52945 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
PDX1P52945 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
PDX1P52945 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
PDX1P52945 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PDX1P52945 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.19■■□□□ 1.14
PDX1P52945 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDX1P52945 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PDX1P52945 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDX1P52945 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDX1P52945 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.19■■□□□ 1.14
PDX1P52945 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PDX1P52945 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.19■■□□□ 1.14
PDX1P52945 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
PDX1P52945 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PDX1P52945 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PDX1P52945 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.19■■□□□ 1.14
PDX1P52945 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.19■■□□□ 1.14
PDX1P52945 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.19■■□□□ 1.14
PDX1P52945 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.19■■□□□ 1.14
PDX1P52945 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDX1P52945 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDX1P52945 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDX1P52945 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.18■■□□□ 1.14
PDX1P52945 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PDX1P52945 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PDX1P52945 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDX1P52945 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
PDX1P52945 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDX1P52945 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
PDX1P52945 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
PDX1P52945 AL355001.2-201ENST00000620617 1191 ntBASIC22.18■■□□□ 1.14
PDX1P52945 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PDX1P52945 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PDX1P52945 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PDX1P52945 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PDX1P52945 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDX1P52945 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.17■■□□□ 1.14
PDX1P52945 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDX1P52945 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.16■■□□□ 1.14
PDX1P52945 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDX1P52945 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
PDX1P52945 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.16■■□□□ 1.14
PDX1P52945 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDX1P52945 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.16■■□□□ 1.14
PDX1P52945 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDX1P52945 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDX1P52945 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.16■■□□□ 1.14
PDX1P52945 AC022211.4-201ENST00000625094 2161 ntBASIC22.15■■□□□ 1.14
PDX1P52945 AC005703.6-201ENST00000623265 1329 ntBASIC22.15■■□□□ 1.14
PDX1P52945 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.15■■□□□ 1.14
PDX1P52945 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
PDX1P52945 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PDX1P52945 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
PDX1P52945 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.14■■□□□ 1.13
PDX1P52945 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PDX1P52945 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PDX1P52945 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.14■■□□□ 1.13
PDX1P52945 AF213884.3-201ENST00000563833 479 ntBASIC22.14■■□□□ 1.13
PDX1P52945 AL136967.2-201ENST00000623968 743 ntBASIC22.14■■□□□ 1.13
PDX1P52945 AC131274.2-201ENST00000580697 1507 ntBASIC22.14■■□□□ 1.13
PDX1P52945 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PDX1P52945 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.13■■□□□ 1.13
PDX1P52945 MIR939-201ENST00000401314 82 ntBASIC22.13■■□□□ 1.13
PDX1P52945 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.13■■□□□ 1.13
PDX1P52945 AC105265.2-201ENST00000467189 838 ntBASIC22.13■■□□□ 1.13
PDX1P52945 AP001330.3-201ENST00000520123 633 ntBASIC22.13■■□□□ 1.13
PDX1P52945 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.13■■□□□ 1.13
PDX1P52945 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PDX1P52945 AC142381.3-201ENST00000568208 1670 ntBASIC22.13■■□□□ 1.13
PDX1P52945 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PDX1P52945 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PDX1P52945 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.13■■□□□ 1.13
PDX1P52945 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PDX1P52945 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.13■■□□□ 1.13
PDX1P52945 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PDX1P52945 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDX1P52945 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.12■■□□□ 1.13
PDX1P52945 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDX1P52945 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.12■■□□□ 1.13
PDX1P52945 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.12■■□□□ 1.13
PDX1P52945 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
PDX1P52945 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.12■■□□□ 1.13
PDX1P52945 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDX1P52945 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PDX1P52945 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.11■■□□□ 1.13
PDX1P52945 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
PDX1P52945 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PDX1P52945 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PDX1P52945 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms