Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 LAS21YJL062W 2493 nt3.73□□□□□ -1.81
VPS55P47111 CTS2YDR371W 1536 nt3.73□□□□□ -1.81
VPS55P47111 RRP3YHR065C 1506 nt3.73□□□□□ -1.81
VPS55P47111 APC1YNL172W 5247 nt3.73□□□□□ -1.81
VPS55P47111 KAP114YGL241W 3015 nt3.72□□□□□ -1.81
VPS55P47111 PAD1YDR538W 729 nt3.72□□□□□ -1.81
VPS55P47111 APS1YLR170C 471 nt3.72□□□□□ -1.81
VPS55P47111 TRS33YOR115C 807 nt3.72□□□□□ -1.81
VPS55P47111 AIM10YER087W 1731 nt3.72□□□□□ -1.81
VPS55P47111 PDR15YDR406W 4590 nt3.72□□□□□ -1.81
VPS55P47111 CRT10YOL063C 2874 nt3.72□□□□□ -1.81
VPS55P47111 ESF1YDR365C 1887 nt3.71□□□□□ -1.82
VPS55P47111 FAA3YIL009W 2085 nt3.71□□□□□ -1.82
VPS55P47111 ATM1YMR301C 2073 nt3.71□□□□□ -1.82
VPS55P47111 PXA1YPL147W 2613 nt3.71□□□□□ -1.82
VPS55P47111 CAB1YDR531W 1104 nt3.71□□□□□ -1.82
VPS55P47111 YGR016WYGR016W 573 nt3.71□□□□□ -1.82
VPS55P47111 YHL049CYHL049C 816 nt3.71□□□□□ -1.82
VPS55P47111 RPL43BYJR094W-A 279 nt3.71□□□□□ -1.82
VPS55P47111 YAR019W-AYAR019W-A 333 nt3.71□□□□□ -1.82
VPS55P47111 CPR6YLR216C 1116 nt3.71□□□□□ -1.82
VPS55P47111 PDB1YBR221C 1101 nt3.71□□□□□ -1.82
VPS55P47111 SWI3YJL176C 2478 nt3.71□□□□□ -1.82
VPS55P47111 YEF1YEL041W 1488 nt3.71□□□□□ -1.82
VPS55P47111 RAD30YDR419W 1899 nt3.71□□□□□ -1.82
VPS55P47111 LHP1YDL051W 828 nt3.7□□□□□ -1.82
VPS55P47111 YGR153WYGR153W 654 nt3.7□□□□□ -1.82
VPS55P47111 YIL171W-AYIL171W-A 453 nt3.7□□□□□ -1.82
VPS55P47111 MNN11YJL183W 1269 nt3.7□□□□□ -1.82
VPS55P47111 YJL220WYJL220W 453 nt3.7□□□□□ -1.82
VPS55P47111 snR19snR19 568 nt3.7□□□□□ -1.82
VPS55P47111 SRV2YNL138W 1581 nt3.7□□□□□ -1.82
VPS55P47111 RBA50YDR527W 1320 nt3.7□□□□□ -1.82
VPS55P47111 YFR034W-AYFR034W-A 288 nt3.69□□□□□ -1.82
VPS55P47111 GAT3YLR013W 426 nt3.69□□□□□ -1.82
VPS55P47111 CDC28YBR160W 897 nt3.69□□□□□ -1.82
VPS55P47111 KAR2YJL034W 2049 nt3.69□□□□□ -1.82
VPS55P47111 STR2YJR130C 1920 nt3.69□□□□□ -1.82
VPS55P47111 VID22YLR373C 2706 nt3.69□□□□□ -1.82
VPS55P47111 THI20YOL055C 1656 nt3.68□□□□□ -1.82
VPS55P47111 FUM1YPL262W 1467 nt3.68□□□□□ -1.82
VPS55P47111 YEL067CYEL067C 588 nt3.68□□□□□ -1.82
VPS55P47111 TYW3YGL050W 822 nt3.68□□□□□ -1.82
VPS55P47111 PCT1YGR202C 1275 nt3.68□□□□□ -1.82
VPS55P47111 YPR169W-AYPR169W-A 219 nt3.68□□□□□ -1.82
VPS55P47111 YPR170W-BYPR170W-B 258 nt3.68□□□□□ -1.82
VPS55P47111 RPO26YPR187W 468 nt3.68□□□□□ -1.82
VPS55P47111 GMC1YDR506C 1827 nt3.67□□□□□ -1.82
VPS55P47111 HXT7YDR342C 1713 nt3.67□□□□□ -1.82
VPS55P47111 HXT6YDR343C 1713 nt3.67□□□□□ -1.82
VPS55P47111 MSE1YOL033W 1611 nt3.67□□□□□ -1.82
VPS55P47111 HIR2YOR038C 2628 nt3.67□□□□□ -1.82
VPS55P47111 PRP28YDR243C 1767 nt3.67□□□□□ -1.82
VPS55P47111 YLF2YHL014C 1218 nt3.67□□□□□ -1.82
VPS55P47111 YKL023WYKL023W 834 nt3.67□□□□□ -1.82
VPS55P47111 YBL006W-AYBL006W-A 150 nt3.67□□□□□ -1.82
VPS55P47111 GSP2YOR185C 663 nt3.67□□□□□ -1.82
VPS55P47111 EMP46YLR080W 1335 nt3.67□□□□□ -1.82
VPS55P47111 TIF4632YGL049C 2745 nt3.66□□□□□ -1.82
VPS55P47111 LPL1YOR059C 1353 nt3.66□□□□□ -1.82
VPS55P47111 APC4YDR118W 1959 nt3.66□□□□□ -1.82
VPS55P47111 TFB3YDR460W 966 nt3.66□□□□□ -1.82
VPS55P47111 UBA3YPR066W 900 nt3.66□□□□□ -1.82
VPS55P47111 YCL012CYCL012C 405 nt3.66□□□□□ -1.82
VPS55P47111 HSP31YDR533C 714 nt3.65□□□□□ -1.83
VPS55P47111 SUT1YGL162W 900 nt3.65□□□□□ -1.83
VPS55P47111 SLZ1YNL196C 897 nt3.65□□□□□ -1.83
VPS55P47111 YPR109WYPR109W 885 nt3.65□□□□□ -1.83
VPS55P47111 STP4YDL048C 1473 nt3.65□□□□□ -1.83
VPS55P47111 KCH1YJR054W 1494 nt3.65□□□□□ -1.83
VPS55P47111 BOP2YLR267W 1713 nt3.64□□□□□ -1.83
VPS55P47111 PMA1YGL008C 2757 nt3.64□□□□□ -1.83
VPS55P47111 TUL1YKL034W 2277 nt3.64□□□□□ -1.83
VPS55P47111 RIM21YNL294C 1602 nt3.64□□□□□ -1.83
VPS55P47111 ARP1YHR129C 1155 nt3.64□□□□□ -1.83
VPS55P47111 YIR020W-AYIR020W-A 243 nt3.64□□□□□ -1.83
VPS55P47111 RPP0YLR340W 939 nt3.64□□□□□ -1.83
VPS55P47111 SAP30YMR263W 606 nt3.64□□□□□ -1.83
VPS55P47111 MAG2YLR427W 2013 nt3.64□□□□□ -1.83
VPS55P47111 SYP1YCR030C 2613 nt3.64□□□□□ -1.83
VPS55P47111 SIT1YEL065W 1887 nt3.64□□□□□ -1.83
VPS55P47111 SUP35YDR172W 2058 nt3.64□□□□□ -1.83
VPS55P47111 FRS1YLR060W 1788 nt3.63□□□□□ -1.83
VPS55P47111 HOS1YPR068C 1413 nt3.63□□□□□ -1.83
VPS55P47111 VBA2YBR293W 1425 nt3.63□□□□□ -1.83
VPS55P47111 GRC3YLL035W 1899 nt3.63□□□□□ -1.83
VPS55P47111 YPL260WYPL260W 1656 nt3.63□□□□□ -1.83
VPS55P47111 ARF2YDL137W 546 nt3.63□□□□□ -1.83
VPS55P47111 YEL045CYEL045C 426 nt3.63□□□□□ -1.83
VPS55P47111 LYS5YGL154C 819 nt3.63□□□□□ -1.83
VPS55P47111 NCS6YGL211W 1080 nt3.63□□□□□ -1.83
VPS55P47111 RCL1YOL010W 1104 nt3.63□□□□□ -1.83
VPS55P47111 HSP82YPL240C 2130 nt3.63□□□□□ -1.83
VPS55P47111 MAK3YPR051W 531 nt3.63□□□□□ -1.83
VPS55P47111 ATG14YBR128C 1035 nt3.63□□□□□ -1.83
VPS55P47111 NSI1YDR026C 1713 nt3.63□□□□□ -1.83
VPS55P47111 RRB1YMR131C 1536 nt3.63□□□□□ -1.83
VPS55P47111 RVB1YDR190C 1392 nt3.63□□□□□ -1.83
VPS55P47111 SDA1YGR245C 2304 nt3.62□□□□□ -1.83
VPS55P47111 YMR196WYMR196W 3267 nt3.62□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms