Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.67■□□□□ 0.58
NKX2-1P43699 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NKX2-1P43699 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NKX2-1P43699 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
NKX2-1P43699 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
NKX2-1P43699 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NKX2-1P43699 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.67■□□□□ 0.58
NKX2-1P43699 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.67■□□□□ 0.58
NKX2-1P43699 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NKX2-1P43699 DUSP8P3-201ENST00000399571 1760 ntBASIC18.67■□□□□ 0.58
NKX2-1P43699 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NKX2-1P43699 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NKX2-1P43699 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.66■□□□□ 0.58
NKX2-1P43699 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-1P43699 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-1P43699 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.66■□□□□ 0.58
NKX2-1P43699 C1orf229-201ENST00000623686 2258 ntBASIC18.66■□□□□ 0.58
NKX2-1P43699 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-1P43699 AL157400.5-201ENST00000507624 621 ntBASIC18.66■□□□□ 0.58
NKX2-1P43699 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-1P43699 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-1P43699 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-1P43699 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-1P43699 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
NKX2-1P43699 AC092068.2-201ENST00000590491 1708 ntBASIC18.66■□□□□ 0.58
NKX2-1P43699 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
NKX2-1P43699 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
NKX2-1P43699 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NKX2-1P43699 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NKX2-1P43699 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NKX2-1P43699 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NKX2-1P43699 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NKX2-1P43699 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.65■□□□□ 0.58
NKX2-1P43699 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NKX2-1P43699 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NKX2-1P43699 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NKX2-1P43699 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NKX2-1P43699 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
NKX2-1P43699 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
NKX2-1P43699 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NKX2-1P43699 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
NKX2-1P43699 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NKX2-1P43699 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NKX2-1P43699 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NKX2-1P43699 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NKX2-1P43699 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NKX2-1P43699 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NKX2-1P43699 LINC00526-201ENST00000581067 1875 ntBASIC18.64■□□□□ 0.57
NKX2-1P43699 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NKX2-1P43699 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NKX2-1P43699 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
NKX2-1P43699 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.63■□□□□ 0.57
NKX2-1P43699 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NKX2-1P43699 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NKX2-1P43699 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NKX2-1P43699 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NKX2-1P43699 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.63■□□□□ 0.57
NKX2-1P43699 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
NKX2-1P43699 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NKX2-1P43699 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
NKX2-1P43699 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NKX2-1P43699 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.63■□□□□ 0.57
NKX2-1P43699 GUSBP5-202ENST00000510805 1989 ntBASIC18.62■□□□□ 0.57
NKX2-1P43699 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NKX2-1P43699 MACF1-219ENST00000484793 834 ntTSL 2 BASIC18.62■□□□□ 0.57
NKX2-1P43699 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.62■□□□□ 0.57
NKX2-1P43699 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.62■□□□□ 0.57
NKX2-1P43699 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
NKX2-1P43699 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
NKX2-1P43699 SMPD5-203ENST00000639008 1464 ntBASIC18.62■□□□□ 0.57
NKX2-1P43699 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.62■□□□□ 0.57
NKX2-1P43699 AC127496.7-201ENST00000625110 1798 ntBASIC18.62■□□□□ 0.57
NKX2-1P43699 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NKX2-1P43699 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NKX2-1P43699 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NKX2-1P43699 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NKX2-1P43699 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NKX2-1P43699 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NKX2-1P43699 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.61■□□□□ 0.57
NKX2-1P43699 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
NKX2-1P43699 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NKX2-1P43699 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NKX2-1P43699 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.61■□□□□ 0.57
NKX2-1P43699 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
NKX2-1P43699 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.61■□□□□ 0.57
NKX2-1P43699 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NKX2-1P43699 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.6■□□□□ 0.57
NKX2-1P43699 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NKX2-1P43699 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NKX2-1P43699 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NKX2-1P43699 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NKX2-1P43699 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NKX2-1P43699 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.59■□□□□ 0.57
NKX2-1P43699 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
NKX2-1P43699 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
NKX2-1P43699 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.59■□□□□ 0.57
NKX2-1P43699 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
NKX2-1P43699 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NKX2-1P43699 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NKX2-1P43699 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms