Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 GUS1YGL245W 2127 nt5.74□□□□□ -1.49
RPN11P43588 AIM7YDR063W 450 nt5.74□□□□□ -1.49
RPN11P43588 MMS21YEL019C 804 nt5.74□□□□□ -1.49
RPN11P43588 NQM1YGR043C 1002 nt5.74□□□□□ -1.49
RPN11P43588 YGR291CYGR291C 222 nt5.74□□□□□ -1.49
RPN11P43588 CDC11YJR076C 1248 nt5.74□□□□□ -1.49
RPN11P43588 UTP11YKL099C 753 nt5.74□□□□□ -1.49
RPN11P43588 SLZ1YNL196C 897 nt5.74□□□□□ -1.49
RPN11P43588 YBR298C-AYBR298C-A 222 nt5.74□□□□□ -1.49
RPN11P43588 VTH1YIL173W 4650 nt5.74□□□□□ -1.49
RPN11P43588 VTH2YJL222W 4650 nt5.74□□□□□ -1.49
RPN11P43588 RAD30YDR419W 1899 nt5.73□□□□□ -1.49
RPN11P43588 CDC12YHR107C 1224 nt5.73□□□□□ -1.49
RPN11P43588 YIR020W-AYIR020W-A 243 nt5.73□□□□□ -1.49
RPN11P43588 YJU2YKL095W 837 nt5.73□□□□□ -1.49
RPN11P43588 ODC2YOR222W 924 nt5.73□□□□□ -1.49
RPN11P43588 GUF1YLR289W 1938 nt5.73□□□□□ -1.49
RPN11P43588 ASA1YPR085C 1332 nt5.73□□□□□ -1.49
RPN11P43588 MSN2YMR037C 2115 nt5.72□□□□□ -1.49
RPN11P43588 ZPS1YOL154W 750 nt5.72□□□□□ -1.49
RPN11P43588 ISU2YOR226C 471 nt5.72□□□□□ -1.49
RPN11P43588 YEL077CYEL077C 3834 nt5.72□□□□□ -1.49
RPN11P43588 CBF5YLR175W 1452 nt5.71□□□□□ -1.49
RPN11P43588 YCR006CYCR006C 474 nt5.71□□□□□ -1.5
RPN11P43588 SNF11YDR073W 510 nt5.71□□□□□ -1.5
RPN11P43588 FRA2YGL220W 363 nt5.71□□□□□ -1.5
RPN11P43588 YNL228WYNL228W 777 nt5.71□□□□□ -1.5
RPN11P43588 ECM2YBR065C 1095 nt5.71□□□□□ -1.5
RPN11P43588 MRC1YCL061C 3291 nt5.71□□□□□ -1.5
RPN11P43588 GPI18YBR004C 1302 nt5.71□□□□□ -1.5
RPN11P43588 CPS1YJL172W 1731 nt5.71□□□□□ -1.5
RPN11P43588 AIM21YIR003W 2040 nt5.7□□□□□ -1.5
RPN11P43588 WHI4YDL224C 1950 nt5.7□□□□□ -1.5
RPN11P43588 YDL023CYDL023C 321 nt5.7□□□□□ -1.5
RPN11P43588 GSY1YFR015C 2127 nt5.7□□□□□ -1.5
RPN11P43588 YJL107CYJL107C 1164 nt5.7□□□□□ -1.5
RPN11P43588 YBL006W-AYBL006W-A 150 nt5.7□□□□□ -1.5
RPN11P43588 FAP1YNL023C 2898 nt5.7□□□□□ -1.5
RPN11P43588 UTP6YDR449C 1323 nt5.7□□□□□ -1.5
RPN11P43588 PTR2YKR093W 1806 nt5.69□□□□□ -1.5
RPN11P43588 CTS1YLR286C 1689 nt5.69□□□□□ -1.5
RPN11P43588 NTA1YJR062C 1374 nt5.69□□□□□ -1.5
RPN11P43588 KTR5YNL029C 1569 nt5.69□□□□□ -1.5
RPN11P43588 SAP4YGL229C 2457 nt5.69□□□□□ -1.5
RPN11P43588 ALG6YOR002W 1635 nt5.68□□□□□ -1.5
RPN11P43588 MMS2YGL087C 414 nt5.68□□□□□ -1.5
RPN11P43588 AIM41YOR215C 558 nt5.68□□□□□ -1.5
RPN11P43588 RET3YPL010W 570 nt5.68□□□□□ -1.5
RPN11P43588 CLB2YPR119W 1476 nt5.68□□□□□ -1.5
RPN11P43588 KIN2YLR096W 3444 nt5.67□□□□□ -1.5
RPN11P43588 CPR1YDR155C 489 nt5.67□□□□□ -1.5
RPN11P43588 YER147C-AYER147C-A 411 nt5.67□□□□□ -1.5
RPN11P43588 DBP8YHR169W 1296 nt5.67□□□□□ -1.5
RPN11P43588 YJR096WYJR096W 849 nt5.67□□□□□ -1.5
RPN11P43588 XPT1YJR133W 630 nt5.67□□□□□ -1.5
RPN11P43588 RSF1YMR030W 1131 nt5.67□□□□□ -1.5
RPN11P43588 PDX3YBR035C 687 nt5.67□□□□□ -1.5
RPN11P43588 MET12YPL023C 1974 nt5.67□□□□□ -1.5
RPN11P43588 VHS2YIL135C 1311 nt5.67□□□□□ -1.5
RPN11P43588 GAD1YMR250W 1758 nt5.67□□□□□ -1.5
RPN11P43588 RSM23YGL129C 1353 nt5.67□□□□□ -1.5
RPN11P43588 ATG7YHR171W 1893 nt5.66□□□□□ -1.5
RPN11P43588 PEX7YDR142C 1128 nt5.66□□□□□ -1.5
RPN11P43588 YGR066CYGR066C 879 nt5.66□□□□□ -1.5
RPN11P43588 KRE9YJL174W 831 nt5.66□□□□□ -1.5
RPN11P43588 NAT5YOR253W 531 nt5.66□□□□□ -1.5
RPN11P43588 RET1YOR207C 3450 nt5.66□□□□□ -1.5
RPN11P43588 HXT17YNR072W 1695 nt5.66□□□□□ -1.5
RPN11P43588 TRS23YDR246W 660 nt5.65□□□□□ -1.5
RPN11P43588 ERP2YAL007C 648 nt5.65□□□□□ -1.5
RPN11P43588 RPL43BYJR094W-A 279 nt5.65□□□□□ -1.5
RPN11P43588 PML1YLR016C 615 nt5.65□□□□□ -1.5
RPN11P43588 YNR068CYNR068C 819 nt5.65□□□□□ -1.5
RPN11P43588 SSZ1YHR064C 1617 nt5.65□□□□□ -1.51
RPN11P43588 PUS1YPL212C 1635 nt5.65□□□□□ -1.51
RPN11P43588 GDB1YPR184W 4611 nt5.65□□□□□ -1.51
RPN11P43588 TUB3YML124C 1338 nt5.65□□□□□ -1.51
RPN11P43588 AIM17YHL021C 1398 nt5.65□□□□□ -1.51
RPN11P43588 NMT1YLR195C 1368 nt5.65□□□□□ -1.51
RPN11P43588 YMR196WYMR196W 3267 nt5.65□□□□□ -1.51
RPN11P43588 NOG2YNR053C 1461 nt5.64□□□□□ -1.51
RPN11P43588 BRE2YLR015W 1518 nt5.64□□□□□ -1.51
RPN11P43588 MTW1YAL034W-A 870 nt5.64□□□□□ -1.51
RPN11P43588 CNB1YKL190W 528 nt5.64□□□□□ -1.51
RPN11P43588 RDL1YOR285W 420 nt5.64□□□□□ -1.51
RPN11P43588 YPL162CYPL162C 822 nt5.64□□□□□ -1.51
RPN11P43588 ARB1YER036C 1833 nt5.64□□□□□ -1.51
RPN11P43588 MSS1YMR023C 1581 nt5.63□□□□□ -1.51
RPN11P43588 HST4YDR191W 1113 nt5.63□□□□□ -1.51
RPN11P43588 ADK2YER170W 678 nt5.63□□□□□ -1.51
RPN11P43588 RAI1YGL246C 1164 nt5.63□□□□□ -1.51
RPN11P43588 SPO12YHR152W 522 nt5.63□□□□□ -1.51
RPN11P43588 YIL165CYIL165C 360 nt5.63□□□□□ -1.51
RPN11P43588 MAD2YJL030W 591 nt5.63□□□□□ -1.51
RPN11P43588 JJJ3YJR097W 519 nt5.63□□□□□ -1.51
RPN11P43588 TAF4YMR005W 1167 nt5.63□□□□□ -1.51
RPN11P43588 DSE3YOR264W 1293 nt5.63□□□□□ -1.51
RPN11P43588 TFB4YPR056W 1017 nt5.63□□□□□ -1.51
RPN11P43588 SYP1YCR030C 2613 nt5.62□□□□□ -1.51
RPN11P43588 IRS4YKR019C 1848 nt5.62□□□□□ -1.51
Retrieved 100 of 7,029 protein–RNA pairs in 29.6 ms