Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SSR2P43308 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.79■■□□□ 1.08
SSR2P43308 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.79■■□□□ 1.08
SSR2P43308 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SSR2P43308 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.79■■□□□ 1.08
SSR2P43308 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
SSR2P43308 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SSR2P43308 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SSR2P43308 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SSR2P43308 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SSR2P43308 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SSR2P43308 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
SSR2P43308 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SSR2P43308 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.78■■□□□ 1.08
SSR2P43308 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SSR2P43308 AC004448.1-201ENST00000458332 883 ntBASIC21.78■■□□□ 1.08
SSR2P43308 AC009299.2-201ENST00000482477 511 ntBASIC21.78■■□□□ 1.08
SSR2P43308 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
SSR2P43308 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SSR2P43308 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SSR2P43308 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.78■■□□□ 1.08
SSR2P43308 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SSR2P43308 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SSR2P43308 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SSR2P43308 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SSR2P43308 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SSR2P43308 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SSR2P43308 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SSR2P43308 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.77■■□□□ 1.08
SSR2P43308 KRT125P-201ENST00000546827 989 ntBASIC21.77■■□□□ 1.08
SSR2P43308 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SSR2P43308 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SSR2P43308 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SSR2P43308 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SSR2P43308 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SSR2P43308 AC021242.3-201ENST00000607598 1377 ntBASIC21.76■■□□□ 1.07
SSR2P43308 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SSR2P43308 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.76■■□□□ 1.07
SSR2P43308 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SSR2P43308 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.76■■□□□ 1.07
SSR2P43308 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.76■■□□□ 1.07
SSR2P43308 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SSR2P43308 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SSR2P43308 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SSR2P43308 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SSR2P43308 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SSR2P43308 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.75■■□□□ 1.07
SSR2P43308 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SSR2P43308 Z92544.1-202ENST00000571933 1220 ntBASIC21.75■■□□□ 1.07
SSR2P43308 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.75■■□□□ 1.07
SSR2P43308 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SSR2P43308 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SSR2P43308 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SSR2P43308 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SSR2P43308 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SSR2P43308 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.74■■□□□ 1.07
SSR2P43308 SNX5-217ENST00000606557 1087 ntBASIC21.74■■□□□ 1.07
SSR2P43308 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SSR2P43308 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SSR2P43308 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SSR2P43308 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SSR2P43308 ALDH1A3-203ENST00000557963 1670 ntBASIC21.74■■□□□ 1.07
SSR2P43308 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.74■■□□□ 1.07
SSR2P43308 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SSR2P43308 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SSR2P43308 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SSR2P43308 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.74■■□□□ 1.07
SSR2P43308 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SSR2P43308 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SSR2P43308 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SSR2P43308 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.73■■□□□ 1.07
SSR2P43308 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.73■■□□□ 1.07
SSR2P43308 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.73■■□□□ 1.07
SSR2P43308 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SSR2P43308 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SSR2P43308 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.72■■□□□ 1.07
SSR2P43308 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SSR2P43308 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SSR2P43308 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.72■■□□□ 1.07
SSR2P43308 AC239859.2-201ENST00000444165 318 ntBASIC21.72■■□□□ 1.07
SSR2P43308 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SSR2P43308 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.72■■□□□ 1.07
SSR2P43308 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SSR2P43308 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SSR2P43308 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SSR2P43308 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SSR2P43308 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SSR2P43308 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SSR2P43308 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SSR2P43308 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SSR2P43308 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.71■■□□□ 1.07
SSR2P43308 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.71■■□□□ 1.07
SSR2P43308 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.71■■□□□ 1.07
SSR2P43308 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
SSR2P43308 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SSR2P43308 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.71■■□□□ 1.07
SSR2P43308 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SSR2P43308 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSR2P43308 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
SSR2P43308 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms