Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
GRIA1P42261 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.25■■□□□ 1.31
GRIA1P42261 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.24■■□□□ 1.31
GRIA1P42261 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
GRIA1P42261 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
GRIA1P42261 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.24■■□□□ 1.31
GRIA1P42261 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
GRIA1P42261 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.24■■□□□ 1.31
GRIA1P42261 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.24■■□□□ 1.31
GRIA1P42261 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
GRIA1P42261 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
GRIA1P42261 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
GRIA1P42261 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
GRIA1P42261 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
GRIA1P42261 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.23■■□□□ 1.31
GRIA1P42261 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
GRIA1P42261 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
GRIA1P42261 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.23■■□□□ 1.31
GRIA1P42261 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
GRIA1P42261 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.23■■□□□ 1.31
GRIA1P42261 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
GRIA1P42261 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.23■■□□□ 1.31
GRIA1P42261 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.23■■□□□ 1.31
GRIA1P42261 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.23■■□□□ 1.31
GRIA1P42261 AL022069.1-201ENST00000568025 1636 ntBASIC23.22■■□□□ 1.31
GRIA1P42261 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
GRIA1P42261 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
GRIA1P42261 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.22■■□□□ 1.31
GRIA1P42261 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
GRIA1P42261 AC068473.5-201ENST00000616428 2072 ntBASIC23.22■■□□□ 1.31
GRIA1P42261 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
GRIA1P42261 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
GRIA1P42261 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
GRIA1P42261 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
GRIA1P42261 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
GRIA1P42261 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
GRIA1P42261 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
GRIA1P42261 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.21■■□□□ 1.31
GRIA1P42261 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
GRIA1P42261 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
GRIA1P42261 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
GRIA1P42261 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.2■■□□□ 1.3
GRIA1P42261 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
GRIA1P42261 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
GRIA1P42261 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
GRIA1P42261 AF131216.4-201ENST00000638924 1588 ntBASIC23.2■■□□□ 1.3
GRIA1P42261 AL161729.1-201ENST00000604104 1402 ntBASIC23.2■■□□□ 1.3
GRIA1P42261 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.2■■□□□ 1.3
GRIA1P42261 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
GRIA1P42261 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.19■■□□□ 1.3
GRIA1P42261 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
GRIA1P42261 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
GRIA1P42261 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
GRIA1P42261 KRT18P24-201ENST00000344739 1156 ntBASIC23.19■■□□□ 1.3
GRIA1P42261 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
GRIA1P42261 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.19■■□□□ 1.3
GRIA1P42261 AC103834.1-201ENST00000520383 144 ntBASIC23.19■■□□□ 1.3
GRIA1P42261 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.19■■□□□ 1.3
GRIA1P42261 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
GRIA1P42261 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.19■■□□□ 1.3
GRIA1P42261 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.19■■□□□ 1.3
GRIA1P42261 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.19■■□□□ 1.3
GRIA1P42261 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
GRIA1P42261 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.18■■□□□ 1.3
GRIA1P42261 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.18■■□□□ 1.3
GRIA1P42261 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.18■■□□□ 1.3
GRIA1P42261 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.18■■□□□ 1.3
GRIA1P42261 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
GRIA1P42261 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
GRIA1P42261 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.18■■□□□ 1.3
GRIA1P42261 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
GRIA1P42261 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
GRIA1P42261 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
GRIA1P42261 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
GRIA1P42261 MIR4281-201ENST00000580852 62 ntBASIC23.17■■□□□ 1.3
GRIA1P42261 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.17■■□□□ 1.3
GRIA1P42261 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
GRIA1P42261 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
GRIA1P42261 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
GRIA1P42261 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
GRIA1P42261 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
GRIA1P42261 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
GRIA1P42261 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
GRIA1P42261 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
GRIA1P42261 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
GRIA1P42261 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
GRIA1P42261 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
GRIA1P42261 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.16■■□□□ 1.3
GRIA1P42261 THA1P-201ENST00000590384 1145 ntBASIC23.16■■□□□ 1.3
GRIA1P42261 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.16■■□□□ 1.3
GRIA1P42261 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
GRIA1P42261 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.15■■□□□ 1.3
GRIA1P42261 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.15■■□□□ 1.3
GRIA1P42261 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
GRIA1P42261 ANOS2P-203ENST00000472227 1816 ntBASIC23.15■■□□□ 1.3
GRIA1P42261 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
GRIA1P42261 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.15■■□□□ 1.3
GRIA1P42261 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.15■■□□□ 1.3
GRIA1P42261 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.15■■□□□ 1.3
GRIA1P42261 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms