Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
KDM5CP41229 AC027612.3-201ENST00000413684 1047 ntBASIC34.84■■■■□ 3.17
KDM5CP41229 AC233992.3-201ENST00000607491 485 ntBASIC34.84■■■■□ 3.17
KDM5CP41229 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC34.83■■■■□ 3.17
KDM5CP41229 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC34.83■■■■□ 3.17
KDM5CP41229 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC34.83■■■■□ 3.17
KDM5CP41229 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC34.83■■■■□ 3.17
KDM5CP41229 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC34.83■■■■□ 3.17
KDM5CP41229 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC34.83■■■■□ 3.17
KDM5CP41229 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC34.83■■■■□ 3.17
KDM5CP41229 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC34.83■■■■□ 3.17
KDM5CP41229 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC34.83■■■■□ 3.17
KDM5CP41229 AL137784.2-201ENST00000607332 1000 ntBASIC34.83■■■■□ 3.17
KDM5CP41229 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC34.82■■■■□ 3.16
KDM5CP41229 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC34.82■■■■□ 3.16
KDM5CP41229 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC34.82■■■■□ 3.16
KDM5CP41229 AC241377.3-202ENST00000626088 1088 ntBASIC34.82■■■■□ 3.16
KDM5CP41229 AC241585.3-202ENST00000628937 1088 ntBASIC34.82■■■■□ 3.16
KDM5CP41229 AC245100.8-202ENST00000629247 1058 ntBASIC34.82■■■■□ 3.16
KDM5CP41229 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC34.82■■■■□ 3.16
KDM5CP41229 ERN1-208ENST00000606895 2068 ntBASIC34.81■■■■□ 3.16
KDM5CP41229 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
KDM5CP41229 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC34.81■■■■□ 3.16
KDM5CP41229 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
KDM5CP41229 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
KDM5CP41229 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC34.81■■■■□ 3.16
KDM5CP41229 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
KDM5CP41229 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC34.8■■■■□ 3.16
KDM5CP41229 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
KDM5CP41229 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC34.8■■■■□ 3.16
KDM5CP41229 SLC47A1P1-202ENST00000449666 945 ntBASIC34.79■■■■□ 3.16
KDM5CP41229 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
KDM5CP41229 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC34.79■■■■□ 3.16
KDM5CP41229 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
KDM5CP41229 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC34.79■■■■□ 3.16
KDM5CP41229 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC34.78■■■■□ 3.16
KDM5CP41229 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC34.78■■■■□ 3.16
KDM5CP41229 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
KDM5CP41229 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC34.78■■■■□ 3.16
KDM5CP41229 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC34.78■■■■□ 3.16
KDM5CP41229 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
KDM5CP41229 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
KDM5CP41229 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC34.77■■■■□ 3.16
KDM5CP41229 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC34.77■■■■□ 3.16
KDM5CP41229 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
KDM5CP41229 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC34.76■■■■□ 3.16
KDM5CP41229 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC34.76■■■■□ 3.16
KDM5CP41229 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC34.76■■■■□ 3.15
KDM5CP41229 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC34.75■■■■□ 3.15
KDM5CP41229 DENND3-207ENST00000518347 850 ntTSL 2 BASIC34.75■■■■□ 3.15
KDM5CP41229 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
KDM5CP41229 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
KDM5CP41229 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
KDM5CP41229 STK32C-205ENST00000456004 607 ntTSL 2 BASIC34.74■■■■□ 3.15
KDM5CP41229 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC34.74■■■■□ 3.15
KDM5CP41229 RAB43-208ENST00000615093 783 ntTSL 5 BASIC34.74■■■■□ 3.15
KDM5CP41229 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
KDM5CP41229 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
KDM5CP41229 AC010501.1-201ENST00000606270 1962 ntBASIC34.74■■■■□ 3.15
KDM5CP41229 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC34.74■■■■□ 3.15
KDM5CP41229 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC34.74■■■■□ 3.15
KDM5CP41229 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
KDM5CP41229 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC34.73■■■■□ 3.15
KDM5CP41229 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
KDM5CP41229 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC34.73■■■■□ 3.15
KDM5CP41229 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
KDM5CP41229 AL121749.1-202ENST00000609313 2153 ntBASIC34.72■■■■□ 3.15
KDM5CP41229 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC34.72■■■■□ 3.15
KDM5CP41229 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC34.72■■■■□ 3.15
KDM5CP41229 GRAMD4P2-201ENST00000423297 1097 ntBASIC34.72■■■■□ 3.15
KDM5CP41229 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
KDM5CP41229 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC34.72■■■■□ 3.15
KDM5CP41229 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC34.72■■■■□ 3.15
KDM5CP41229 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC34.71■■■■□ 3.15
KDM5CP41229 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC34.71■■■■□ 3.15
KDM5CP41229 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
KDM5CP41229 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
KDM5CP41229 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC34.71■■■■□ 3.15
KDM5CP41229 AC009086.3-201ENST00000623486 1008 ntBASIC34.71■■■■□ 3.15
KDM5CP41229 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC34.71■■■■□ 3.15
KDM5CP41229 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC34.71■■■■□ 3.15
KDM5CP41229 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC34.71■■■■□ 3.15
KDM5CP41229 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC34.71■■■■□ 3.15
KDM5CP41229 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
KDM5CP41229 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
KDM5CP41229 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
KDM5CP41229 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC34.7■■■■□ 3.15
KDM5CP41229 MIR3181-201ENST00000578512 73 ntBASIC34.7■■■■□ 3.15
KDM5CP41229 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC34.7■■■■□ 3.15
KDM5CP41229 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC34.7■■■■□ 3.15
KDM5CP41229 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
KDM5CP41229 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC34.7■■■■□ 3.15
KDM5CP41229 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.14
KDM5CP41229 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC34.7■■■■□ 3.14
KDM5CP41229 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC34.7■■■■□ 3.14
KDM5CP41229 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC34.7■■■■□ 3.14
KDM5CP41229 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.14
KDM5CP41229 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC34.69■■■■□ 3.14
KDM5CP41229 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC34.69■■■■□ 3.14
KDM5CP41229 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC34.69■■■■□ 3.14
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms