Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.69■■□□□ 1.06
RPL3P39023 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPL3P39023 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPL3P39023 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
RPL3P39023 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
RPL3P39023 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPL3P39023 KRT18P24-201ENST00000344739 1156 ntBASIC21.68■■□□□ 1.06
RPL3P39023 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RPL3P39023 AC120024.1-201ENST00000562672 995 ntBASIC21.68■■□□□ 1.06
RPL3P39023 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPL3P39023 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RPL3P39023 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RPL3P39023 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPL3P39023 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
RPL3P39023 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
RPL3P39023 AC131274.2-201ENST00000580697 1507 ntBASIC21.67■■□□□ 1.06
RPL3P39023 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPL3P39023 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.67■■□□□ 1.06
RPL3P39023 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RPL3P39023 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPL3P39023 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPL3P39023 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPL3P39023 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.66■■□□□ 1.06
RPL3P39023 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPL3P39023 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RPL3P39023 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.66■■□□□ 1.06
RPL3P39023 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.66■■□□□ 1.06
RPL3P39023 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.66■■□□□ 1.06
RPL3P39023 THA1P-201ENST00000590384 1145 ntBASIC21.66■■□□□ 1.06
RPL3P39023 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
RPL3P39023 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RPL3P39023 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPL3P39023 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPL3P39023 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPL3P39023 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.65■■□□□ 1.06
RPL3P39023 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RPL3P39023 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.65■■□□□ 1.06
RPL3P39023 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.65■■□□□ 1.06
RPL3P39023 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
RPL3P39023 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPL3P39023 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
RPL3P39023 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.64■■□□□ 1.05
RPL3P39023 ALDH1A3-203ENST00000557963 1670 ntBASIC21.64■■□□□ 1.05
RPL3P39023 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RPL3P39023 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.64■■□□□ 1.05
RPL3P39023 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
RPL3P39023 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RPL3P39023 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.64■■□□□ 1.05
RPL3P39023 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
RPL3P39023 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
RPL3P39023 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RPL3P39023 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.64■■□□□ 1.05
RPL3P39023 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
RPL3P39023 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.63■■□□□ 1.05
RPL3P39023 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.63■■□□□ 1.05
RPL3P39023 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPL3P39023 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.63■■□□□ 1.05
RPL3P39023 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.63■■□□□ 1.05
RPL3P39023 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.63■■□□□ 1.05
RPL3P39023 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPL3P39023 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPL3P39023 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPL3P39023 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPL3P39023 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.63■■□□□ 1.05
RPL3P39023 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPL3P39023 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPL3P39023 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPL3P39023 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPL3P39023 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RPL3P39023 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPL3P39023 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
RPL3P39023 AC012354.3-201ENST00000623734 483 ntBASIC21.62■■□□□ 1.05
RPL3P39023 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.62■■□□□ 1.05
RPL3P39023 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RPL3P39023 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.62■■□□□ 1.05
RPL3P39023 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RPL3P39023 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RPL3P39023 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.62■■□□□ 1.05
RPL3P39023 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPL3P39023 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPL3P39023 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.61■■□□□ 1.05
RPL3P39023 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.61■■□□□ 1.05
RPL3P39023 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPL3P39023 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
RPL3P39023 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
RPL3P39023 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
RPL3P39023 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
RPL3P39023 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
RPL3P39023 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPL3P39023 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RPL3P39023 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.61■■□□□ 1.05
RPL3P39023 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.61■■□□□ 1.05
RPL3P39023 MIR4281-201ENST00000580852 62 ntBASIC21.61■■□□□ 1.05
RPL3P39023 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPL3P39023 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.61■■□□□ 1.05
RPL3P39023 ANOS2P-203ENST00000472227 1816 ntBASIC21.61■■□□□ 1.05
RPL3P39023 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RPL3P39023 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPL3P39023 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPL3P39023 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms