Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.11■□□□□ 0.97
LCN1P31025 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.11■□□□□ 0.97
LCN1P31025 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.11■□□□□ 0.97
LCN1P31025 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
LCN1P31025 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LCN1P31025 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LCN1P31025 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LCN1P31025 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
LCN1P31025 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LCN1P31025 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LCN1P31025 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LCN1P31025 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
LCN1P31025 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.1■□□□□ 0.97
LCN1P31025 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LCN1P31025 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.1■□□□□ 0.97
LCN1P31025 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.1■□□□□ 0.97
LCN1P31025 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LCN1P31025 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LCN1P31025 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LCN1P31025 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LCN1P31025 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.09■□□□□ 0.97
LCN1P31025 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
LCN1P31025 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.09■□□□□ 0.97
LCN1P31025 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LCN1P31025 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.09■□□□□ 0.97
LCN1P31025 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.09■□□□□ 0.97
LCN1P31025 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.09■□□□□ 0.97
LCN1P31025 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LCN1P31025 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
LCN1P31025 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.08■□□□□ 0.97
LCN1P31025 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LCN1P31025 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
LCN1P31025 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
LCN1P31025 KRT125P-201ENST00000546827 989 ntBASIC21.08■□□□□ 0.97
LCN1P31025 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
LCN1P31025 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
LCN1P31025 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LCN1P31025 AC004812.2-201ENST00000611079 2094 ntBASIC21.08■□□□□ 0.96
LCN1P31025 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LCN1P31025 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LCN1P31025 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LCN1P31025 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.07■□□□□ 0.96
LCN1P31025 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.07■□□□□ 0.96
LCN1P31025 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LCN1P31025 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LCN1P31025 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
LCN1P31025 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.07■□□□□ 0.96
LCN1P31025 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.07■□□□□ 0.96
LCN1P31025 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.07■□□□□ 0.96
LCN1P31025 SNX5-217ENST00000606557 1087 ntBASIC21.07■□□□□ 0.96
LCN1P31025 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LCN1P31025 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LCN1P31025 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.07■□□□□ 0.96
LCN1P31025 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.06■□□□□ 0.96
LCN1P31025 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LCN1P31025 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LCN1P31025 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.06■□□□□ 0.96
LCN1P31025 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
LCN1P31025 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
LCN1P31025 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.05■□□□□ 0.96
LCN1P31025 AL451085.2-201ENST00000605085 799 ntBASIC21.05■□□□□ 0.96
LCN1P31025 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LCN1P31025 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
LCN1P31025 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
LCN1P31025 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
LCN1P31025 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LCN1P31025 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LCN1P31025 ALDH1A3-203ENST00000557963 1670 ntBASIC21.05■□□□□ 0.96
LCN1P31025 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LCN1P31025 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LCN1P31025 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LCN1P31025 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LCN1P31025 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LCN1P31025 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
LCN1P31025 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LCN1P31025 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
LCN1P31025 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
LCN1P31025 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.04■□□□□ 0.96
LCN1P31025 AC009299.2-201ENST00000482477 511 ntBASIC21.04■□□□□ 0.96
LCN1P31025 MIR6722-201ENST00000617286 78 ntBASIC21.04■□□□□ 0.96
LCN1P31025 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
LCN1P31025 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
LCN1P31025 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.04■□□□□ 0.96
LCN1P31025 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LCN1P31025 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LCN1P31025 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LCN1P31025 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LCN1P31025 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.03■□□□□ 0.96
LCN1P31025 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
LCN1P31025 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.03■□□□□ 0.96
LCN1P31025 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.03■□□□□ 0.96
LCN1P31025 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LCN1P31025 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LCN1P31025 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LCN1P31025 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LCN1P31025 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LCN1P31025 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.02■□□□□ 0.96
LCN1P31025 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.02■□□□□ 0.96
LCN1P31025 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LCN1P31025 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms