Protein–RNA interactions for Protein: P0CG47

UBB, Polyubiquitin-B, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP0CG47 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
UBBP0CG47 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
UBBP0CG47 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBBP0CG47 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBBP0CG47 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBBP0CG47 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBBP0CG47 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBBP0CG47 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBBP0CG47 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBBP0CG47 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBBP0CG47 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.66■□□□□ 0.74
UBBP0CG47 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.66■□□□□ 0.74
UBBP0CG47 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBBP0CG47 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.66■□□□□ 0.74
UBBP0CG47 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBBP0CG47 AL117328.2-201ENST00000624617 1940 ntBASIC19.66■□□□□ 0.74
UBBP0CG47 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.65■□□□□ 0.74
UBBP0CG47 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBBP0CG47 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.65■□□□□ 0.74
UBBP0CG47 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
UBBP0CG47 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
UBBP0CG47 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBBP0CG47 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBBP0CG47 RPS2P7-201ENST00000447334 885 ntBASIC19.65■□□□□ 0.74
UBBP0CG47 AC133552.2-201ENST00000619106 1032 ntBASIC19.65■□□□□ 0.74
UBBP0CG47 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UBBP0CG47 AC009831.1-201ENST00000580420 1582 ntBASIC19.65■□□□□ 0.74
UBBP0CG47 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBBP0CG47 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UBBP0CG47 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.65■□□□□ 0.74
UBBP0CG47 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UBBP0CG47 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
UBBP0CG47 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
UBBP0CG47 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
UBBP0CG47 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.64■□□□□ 0.74
UBBP0CG47 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
UBBP0CG47 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBBP0CG47 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBBP0CG47 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBBP0CG47 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBBP0CG47 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBBP0CG47 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.64■□□□□ 0.73
UBBP0CG47 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.64■□□□□ 0.73
UBBP0CG47 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
UBBP0CG47 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBBP0CG47 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
UBBP0CG47 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
UBBP0CG47 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBBP0CG47 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBBP0CG47 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.63■□□□□ 0.73
UBBP0CG47 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
UBBP0CG47 AL592295.1-201ENST00000400984 884 ntBASIC19.63■□□□□ 0.73
UBBP0CG47 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBBP0CG47 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.63■□□□□ 0.73
UBBP0CG47 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBBP0CG47 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBBP0CG47 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBBP0CG47 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBBP0CG47 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBBP0CG47 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.62■□□□□ 0.73
UBBP0CG47 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
UBBP0CG47 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBBP0CG47 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
UBBP0CG47 AC018755.3-202ENST00000596210 929 ntBASIC19.62■□□□□ 0.73
UBBP0CG47 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
UBBP0CG47 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBBP0CG47 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBBP0CG47 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
UBBP0CG47 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.62■□□□□ 0.73
UBBP0CG47 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBBP0CG47 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.61■□□□□ 0.73
UBBP0CG47 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBBP0CG47 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
UBBP0CG47 ANOS2P-203ENST00000472227 1816 ntBASIC19.61■□□□□ 0.73
UBBP0CG47 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UBBP0CG47 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
UBBP0CG47 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UBBP0CG47 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
UBBP0CG47 MIR4449-201ENST00000578365 66 ntBASIC19.61■□□□□ 0.73
UBBP0CG47 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
UBBP0CG47 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.61■□□□□ 0.73
UBBP0CG47 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBBP0CG47 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
UBBP0CG47 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBBP0CG47 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.61■□□□□ 0.73
UBBP0CG47 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBBP0CG47 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.61■□□□□ 0.73
UBBP0CG47 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBBP0CG47 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBBP0CG47 AC092068.2-201ENST00000590491 1708 ntBASIC19.6■□□□□ 0.73
UBBP0CG47 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBBP0CG47 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.6■□□□□ 0.73
UBBP0CG47 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBBP0CG47 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
UBBP0CG47 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.6■□□□□ 0.73
UBBP0CG47 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
UBBP0CG47 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.6■□□□□ 0.73
UBBP0CG47 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
UBBP0CG47 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBBP0CG47 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms