Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.96
THBS1P07996 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
THBS1P07996 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.07■□□□□ 0.96
THBS1P07996 MIR4281-201ENST00000580852 62 ntBASIC21.07■□□□□ 0.96
THBS1P07996 MIR4508-201ENST00000584178 70 ntBASIC21.07■□□□□ 0.96
THBS1P07996 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.07■□□□□ 0.96
THBS1P07996 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
THBS1P07996 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.07■□□□□ 0.96
THBS1P07996 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
THBS1P07996 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
THBS1P07996 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.06■□□□□ 0.96
THBS1P07996 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
THBS1P07996 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.06■□□□□ 0.96
THBS1P07996 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
THBS1P07996 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
THBS1P07996 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
THBS1P07996 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
THBS1P07996 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
THBS1P07996 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
THBS1P07996 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
THBS1P07996 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
THBS1P07996 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
THBS1P07996 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
THBS1P07996 AF131216.4-201ENST00000638924 1588 ntBASIC21.05■□□□□ 0.96
THBS1P07996 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.05■□□□□ 0.96
THBS1P07996 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
THBS1P07996 ALDH1A3-203ENST00000557963 1670 ntBASIC21.05■□□□□ 0.96
THBS1P07996 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
THBS1P07996 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.05■□□□□ 0.96
THBS1P07996 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
THBS1P07996 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
THBS1P07996 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.04■□□□□ 0.96
THBS1P07996 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
THBS1P07996 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.04■□□□□ 0.96
THBS1P07996 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
THBS1P07996 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
THBS1P07996 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
THBS1P07996 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
THBS1P07996 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
THBS1P07996 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
THBS1P07996 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.04■□□□□ 0.96
THBS1P07996 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
THBS1P07996 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
THBS1P07996 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
THBS1P07996 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
THBS1P07996 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
THBS1P07996 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
THBS1P07996 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
THBS1P07996 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
THBS1P07996 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.03■□□□□ 0.96
THBS1P07996 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
THBS1P07996 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.03■□□□□ 0.96
THBS1P07996 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
THBS1P07996 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.03■□□□□ 0.96
THBS1P07996 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
THBS1P07996 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
THBS1P07996 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
THBS1P07996 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
THBS1P07996 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
THBS1P07996 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
THBS1P07996 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.03■□□□□ 0.96
THBS1P07996 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
THBS1P07996 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.03■□□□□ 0.96
THBS1P07996 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
THBS1P07996 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
THBS1P07996 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
THBS1P07996 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
THBS1P07996 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.02■□□□□ 0.96
THBS1P07996 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
THBS1P07996 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
THBS1P07996 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.02■□□□□ 0.96
THBS1P07996 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
THBS1P07996 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.02■□□□□ 0.96
THBS1P07996 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
THBS1P07996 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
THBS1P07996 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
THBS1P07996 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
THBS1P07996 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
THBS1P07996 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
THBS1P07996 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
THBS1P07996 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
THBS1P07996 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.01■□□□□ 0.95
THBS1P07996 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
THBS1P07996 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.01■□□□□ 0.95
THBS1P07996 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
THBS1P07996 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
THBS1P07996 ANOS2P-203ENST00000472227 1816 ntBASIC21■□□□□ 0.95
THBS1P07996 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
THBS1P07996 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
THBS1P07996 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21■□□□□ 0.95
THBS1P07996 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
THBS1P07996 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
THBS1P07996 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21■□□□□ 0.95
THBS1P07996 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21■□□□□ 0.95
THBS1P07996 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21■□□□□ 0.95
THBS1P07996 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
THBS1P07996 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.99■□□□□ 0.95
THBS1P07996 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
THBS1P07996 AC092068.2-201ENST00000590491 1708 ntBASIC20.99■□□□□ 0.95
THBS1P07996 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms