Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RETP07949 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RETP07949 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.09■■□□□ 1.29
RETP07949 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RETP07949 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.09■■□□□ 1.29
RETP07949 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
RETP07949 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RETP07949 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.09■■□□□ 1.29
RETP07949 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RETP07949 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
RETP07949 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RETP07949 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RETP07949 AC090877.2-201ENST00000558441 1738 ntBASIC23.08■■□□□ 1.29
RETP07949 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RETP07949 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
RETP07949 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RETP07949 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RETP07949 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.08■■□□□ 1.28
RETP07949 AC093323.1-202ENST00000635031 2045 ntBASIC23.08■■□□□ 1.28
RETP07949 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
RETP07949 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.28
RETP07949 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.08■■□□□ 1.28
RETP07949 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RETP07949 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
RETP07949 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.07■■□□□ 1.28
RETP07949 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.07■■□□□ 1.28
RETP07949 AC008764.7-201ENST00000593779 1081 ntBASIC23.07■■□□□ 1.28
RETP07949 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RETP07949 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RETP07949 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RETP07949 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RETP07949 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RETP07949 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
RETP07949 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
RETP07949 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
RETP07949 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RETP07949 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.06■■□□□ 1.28
RETP07949 SERBP1P1-201ENST00000396021 1160 ntBASIC23.06■■□□□ 1.28
RETP07949 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.06■■□□□ 1.28
RETP07949 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RETP07949 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.06■■□□□ 1.28
RETP07949 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.06■■□□□ 1.28
RETP07949 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.06■■□□□ 1.28
RETP07949 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
RETP07949 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RETP07949 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.06■■□□□ 1.28
RETP07949 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RETP07949 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.05■■□□□ 1.28
RETP07949 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RETP07949 AL137784.2-201ENST00000607332 1000 ntBASIC23.05■■□□□ 1.28
RETP07949 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
RETP07949 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RETP07949 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RETP07949 AC005703.6-201ENST00000623265 1329 ntBASIC23.05■■□□□ 1.28
RETP07949 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RETP07949 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
RETP07949 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.04■■□□□ 1.28
RETP07949 AC034268.1-201ENST00000441047 882 ntBASIC23.04■■□□□ 1.28
RETP07949 AC022517.1-201ENST00000592429 346 ntBASIC23.04■■□□□ 1.28
RETP07949 AL138724.1-201ENST00000606771 1088 ntBASIC23.04■■□□□ 1.28
RETP07949 AC011298.3-201ENST00000615796 283 ntBASIC23.04■■□□□ 1.28
RETP07949 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.04■■□□□ 1.28
RETP07949 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.04■■□□□ 1.28
RETP07949 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
RETP07949 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RETP07949 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.04■■□□□ 1.28
RETP07949 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
RETP07949 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
RETP07949 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.03■■□□□ 1.28
RETP07949 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.03■■□□□ 1.28
RETP07949 IKBKGP1-201ENST00000612193 1073 ntBASIC23.03■■□□□ 1.28
RETP07949 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RETP07949 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RETP07949 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.03■■□□□ 1.28
RETP07949 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RETP07949 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
RETP07949 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
RETP07949 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
RETP07949 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
RETP07949 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.02■■□□□ 1.28
RETP07949 AC099791.1-201ENST00000416440 715 ntBASIC23.02■■□□□ 1.28
RETP07949 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.02■■□□□ 1.28
RETP07949 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.02■■□□□ 1.28
RETP07949 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RETP07949 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RETP07949 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RETP07949 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
RETP07949 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.27
RETP07949 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.01■■□□□ 1.27
RETP07949 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RETP07949 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.01■■□□□ 1.27
RETP07949 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.01■■□□□ 1.27
RETP07949 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RETP07949 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RETP07949 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.01■■□□□ 1.27
RETP07949 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.01■■□□□ 1.27
RETP07949 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.01■■□□□ 1.27
RETP07949 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.01■■□□□ 1.27
RETP07949 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.01■■□□□ 1.27
RETP07949 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms