Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HMGN1P05114 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGN1P05114 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGN1P05114 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
HMGN1P05114 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
HMGN1P05114 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGN1P05114 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.67■□□□□ 0.9
HMGN1P05114 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.67■□□□□ 0.9
HMGN1P05114 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGN1P05114 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGN1P05114 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGN1P05114 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
HMGN1P05114 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
HMGN1P05114 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGN1P05114 AC092068.2-201ENST00000590491 1708 ntBASIC20.66■□□□□ 0.9
HMGN1P05114 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.66■□□□□ 0.9
HMGN1P05114 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
HMGN1P05114 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HMGN1P05114 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGN1P05114 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.66■□□□□ 0.9
HMGN1P05114 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HMGN1P05114 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HMGN1P05114 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
HMGN1P05114 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMGN1P05114 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.65■□□□□ 0.9
HMGN1P05114 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMGN1P05114 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
HMGN1P05114 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
HMGN1P05114 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.65■□□□□ 0.9
HMGN1P05114 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
HMGN1P05114 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMGN1P05114 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.64■□□□□ 0.9
HMGN1P05114 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HMGN1P05114 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
HMGN1P05114 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HMGN1P05114 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.64■□□□□ 0.9
HMGN1P05114 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
HMGN1P05114 MIR4449-201ENST00000578365 66 ntBASIC20.64■□□□□ 0.89
HMGN1P05114 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMGN1P05114 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.64■□□□□ 0.89
HMGN1P05114 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HMGN1P05114 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMGN1P05114 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMGN1P05114 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.64■□□□□ 0.89
HMGN1P05114 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMGN1P05114 AL117328.2-201ENST00000624617 1940 ntBASIC20.63■□□□□ 0.89
HMGN1P05114 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGN1P05114 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGN1P05114 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGN1P05114 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGN1P05114 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.63■□□□□ 0.89
HMGN1P05114 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
HMGN1P05114 DUSP8P3-201ENST00000399571 1760 ntBASIC20.63■□□□□ 0.89
HMGN1P05114 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
HMGN1P05114 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HMGN1P05114 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.63■□□□□ 0.89
HMGN1P05114 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGN1P05114 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.62■□□□□ 0.89
HMGN1P05114 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGN1P05114 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HMGN1P05114 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HMGN1P05114 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGN1P05114 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.62■□□□□ 0.89
HMGN1P05114 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
HMGN1P05114 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HMGN1P05114 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HMGN1P05114 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
HMGN1P05114 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.62■□□□□ 0.89
HMGN1P05114 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
HMGN1P05114 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGN1P05114 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGN1P05114 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
HMGN1P05114 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
HMGN1P05114 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMGN1P05114 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HMGN1P05114 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMGN1P05114 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
HMGN1P05114 AC087393.1-201ENST00000582896 145 ntBASIC20.61■□□□□ 0.89
HMGN1P05114 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMGN1P05114 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HMGN1P05114 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.6■□□□□ 0.89
HMGN1P05114 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMGN1P05114 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMGN1P05114 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
HMGN1P05114 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMGN1P05114 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMGN1P05114 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMGN1P05114 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMGN1P05114 AL022069.1-201ENST00000568025 1636 ntBASIC20.6■□□□□ 0.89
HMGN1P05114 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMGN1P05114 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMGN1P05114 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
HMGN1P05114 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMGN1P05114 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HMGN1P05114 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
HMGN1P05114 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.59■□□□□ 0.89
HMGN1P05114 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.59■□□□□ 0.89
HMGN1P05114 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.59■□□□□ 0.89
HMGN1P05114 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMGN1P05114 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms