Protein–RNA interactions for Protein: P04435

TCRB, T-cell receptor beta chain V region CTL-L17, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBP04435 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.48■□□□□ 0.71
TCRBP04435 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TCRBP04435 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TCRBP04435 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TCRBP04435 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TCRBP04435 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TCRBP04435 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TCRBP04435 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBP04435 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBP04435 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBP04435 AC242852.2-201ENST00000615738 1807 ntBASIC19.47■□□□□ 0.71
TCRBP04435 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBP04435 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBP04435 DUX4L28-201ENST00000623687 678 ntBASIC19.47■□□□□ 0.71
TCRBP04435 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBP04435 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TCRBP04435 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBP04435 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBP04435 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBP04435 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.47■□□□□ 0.71
TCRBP04435 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBP04435 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.46■□□□□ 0.71
TCRBP04435 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.46■□□□□ 0.71
TCRBP04435 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBP04435 MIR219A2-201ENST00000608502 1504 ntBASIC19.46■□□□□ 0.71
TCRBP04435 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBP04435 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBP04435 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBP04435 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
TCRBP04435 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBP04435 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TCRBP04435 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBP04435 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.45■□□□□ 0.7
TCRBP04435 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBP04435 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBP04435 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBP04435 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBP04435 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
TCRBP04435 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBP04435 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.45■□□□□ 0.7
TCRBP04435 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TCRBP04435 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBP04435 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBP04435 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBP04435 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBP04435 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TCRBP04435 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBP04435 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TCRBP04435 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBP04435 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBP04435 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBP04435 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBP04435 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TCRBP04435 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.43■□□□□ 0.7
TCRBP04435 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCRBP04435 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TCRBP04435 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TCRBP04435 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TCRBP04435 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.43■□□□□ 0.7
TCRBP04435 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TCRBP04435 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCRBP04435 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCRBP04435 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCRBP04435 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TCRBP04435 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TCRBP04435 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.42■□□□□ 0.7
TCRBP04435 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TCRBP04435 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TCRBP04435 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TCRBP04435 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TCRBP04435 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.41■□□□□ 0.7
TCRBP04435 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TCRBP04435 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.41■□□□□ 0.7
TCRBP04435 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.41■□□□□ 0.7
TCRBP04435 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TCRBP04435 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TCRBP04435 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TCRBP04435 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.41■□□□□ 0.7
TCRBP04435 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TCRBP04435 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TCRBP04435 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBP04435 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBP04435 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
TCRBP04435 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.4■□□□□ 0.7
TCRBP04435 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBP04435 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBP04435 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TCRBP04435 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.4■□□□□ 0.7
TCRBP04435 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBP04435 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBP04435 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBP04435 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.4■□□□□ 0.7
TCRBP04435 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.4■□□□□ 0.7
TCRBP04435 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TCRBP04435 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
TCRBP04435 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
TCRBP04435 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBP04435 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBP04435 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBP04435 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms